Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yoeB-relE/YoeB-YefM
Location 2905252..2905754 Replicon chromosome
Accession NZ_LR778301
Organism Denitratisoma oestradiolicum strain DSM 16959

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag DENOEST_RS13095 Protein ID WP_145772142.1
Coordinates 2905252..2905506 (-) Length 85 a.a.

Antitoxin (Protein)


Gene name relE Uniprot ID -
Locus tag DENOEST_RS13100 Protein ID WP_145772143.1
Coordinates 2905503..2905754 (-) Length 84 a.a.

Genomic Context

DENOEST_RS13080DENOEST_RS13090DENOEST_RS13110DENOEST_RS13120DENOEST_RS13085DENOEST_RS13095DENOEST_RS13100DENOEST_RS13105DENOEST_RS13125
Location: 2900802..2901710 (909 bp)
Type: Others
Protein ID: WP_145772045.1
Location: 2904538..2905164 (627 bp)
Type: Others
Protein ID: WP_145772141.1
Location: 2907069..2907548 (480 bp)
Type: Others
Protein ID: WP_145772144.1
Location: 2907829..2909193 (1365 bp)
Type: Others
Protein ID: WP_145772145.1
Location: 2901771..2903060 (1290 bp)
Type: Others
Protein ID: WP_197970617.1
Location: 2905252..2905506 (255 bp)
Type: Toxin
Protein ID: WP_145772142.1
Location: 2905503..2905754 (252 bp)
Type: Antitoxin
Protein ID: WP_145772143.1
Location: 2906053..2907021 (969 bp)
Type: Others
Protein ID: Protein_2593
Location: 2909186..2910496 (1311 bp)
Type: Others
Protein ID: WP_145772146.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
DENOEST_RS130802900802..2901710+909WP_145772045.1helix-turn-helix domain-containing protein-
DENOEST_RS130852901771..2903060-1290WP_197970617.1group II intron reverse transcriptase/maturase-
DENOEST_RS130902904538..2905164+627WP_145772141.1hypothetical protein-
DENOEST_RS130952905252..2905506-255WP_145772142.1Txe/YoeB family addiction module toxinToxin
DENOEST_RS131002905503..2905754-252WP_145772143.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
DENOEST_RS131052906053..2907021-969Protein_2593IS110 family transposase-
DENOEST_RS131102907069..2907548+480WP_145772144.1tyrosine-type recombinase/integrase-
DENOEST_RS131202907829..2909193+1365WP_145772145.1hypothetical protein-
DENOEST_RS131252909186..2910496-1311WP_145772146.1adenylosuccinate synthase-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 10321.82 Da        Isoelectric Point: 8.4859

>T289325 WP_145772142.1 NZ_LR778301:c2905506-2905252 [Denitratisoma oestradiolicum]
VKLIFSDEAWEDYLYWQKQDKRMVERINKLIRETEREPFNGVGKPEPLKHALSGFWSRRITDEHRMVYRVVNDALEIVQL
RFHY

Download         Length: 255 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9105.52 Da        Isoelectric Point: 8.0081

>AT289325 WP_145772143.1 NZ_LR778301:c2905754-2905503 [Denitratisoma oestradiolicum]
MDAITYTTARANLATTMDRVCNDHEALIITRNGEQAVVMLSLEDFKALEETAYLLRTPANAKRLLSAIAQLNAGKGVERK
LAK

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References