Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RelE(toxin) |
Location | 629487..629973 | Replicon | chromosome |
Accession | NZ_LR738724 | ||
Organism | Streptococcus suis isolate 9401240 |
Toxin (Protein)
Gene name | relE | Uniprot ID | A0A0Z8G620 |
Locus tag | GPW69_RS03260 | Protein ID | WP_024385504.1 |
Coordinates | 629704..629973 (+) | Length | 90 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | D5AGV1 |
Locus tag | GPW69_RS03255 | Protein ID | WP_002938604.1 |
Coordinates | 629487..629714 (+) | Length | 76 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
GPW69_RS03230 | 624965..625510 | - | 546 | WP_024385507.1 | NAD(P)H-dependent oxidoreductase | - |
GPW69_RS03235 | 625573..626022 | - | 450 | WP_009909619.1 | MarR family transcriptional regulator | - |
GPW69_RS03240 | 626235..626732 | + | 498 | WP_044679671.1 | DUF5590 domain-containing protein | - |
GPW69_RS03245 | 626729..627910 | + | 1182 | WP_024385505.1 | pyridoxal phosphate-dependent aminotransferase | - |
GPW69_RS03250 | 627925..629271 | + | 1347 | WP_014638198.1 | asparagine--tRNA ligase | - |
GPW69_RS03255 | 629487..629714 | + | 228 | WP_002938604.1 | hypothetical protein | Antitoxin |
GPW69_RS03260 | 629704..629973 | + | 270 | WP_024385504.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
GPW69_RS03270 | 630327..631646 | + | 1320 | WP_024412167.1 | MATE family efflux transporter | - |
GPW69_RS03275 | 631830..632207 | + | 378 | WP_024412168.1 | RidA family protein | - |
GPW69_RS03280 | 632229..633116 | + | 888 | WP_024412169.1 | RNase adapter RapZ | - |
GPW69_RS03285 | 633113..634087 | + | 975 | WP_024400159.1 | YvcK family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0Z8G620 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A140EXF0 |