288911

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 799431..799917 Replicon chromosome
Accession NZ_LR738722
Organism Streptococcus suis isolate 861160

Toxin (Protein)


Gene name relE Uniprot ID D5AGV2
Locus tag STREPSUIS_RS04165 Protein ID WP_011922754.1
Coordinates 799648..799917 (+) Length 90 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID D5AGV1
Locus tag STREPSUIS_RS04160 Protein ID WP_002938604.1
Coordinates 799431..799658 (+) Length 76 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
STREPSUIS_RS04135 794764..795309 - 546 WP_002941732.1 NAD(P)H-dependent oxidoreductase -
STREPSUIS_RS04140 795372..795821 - 450 WP_024383028.1 MarR family transcriptional regulator -
STREPSUIS_RS04145 796123..796620 + 498 WP_024405519.1 DUF5590 domain-containing protein -
STREPSUIS_RS04150 796617..797798 + 1182 WP_024383693.1 pyridoxal phosphate-dependent aminotransferase -
STREPSUIS_RS04155 797813..799159 + 1347 WP_024405517.1 asparagine--tRNA ligase -
STREPSUIS_RS04160 799431..799658 + 228 WP_002938604.1 hypothetical protein Antitoxin
STREPSUIS_RS04165 799648..799917 + 270 WP_011922754.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
STREPSUIS_RS04175 800323..801647 + 1325 Protein_764 MATE family efflux transporter -
STREPSUIS_RS04180 801831..802208 + 378 WP_002937263.1 RidA family protein -
STREPSUIS_RS04185 802230..803117 + 888 WP_074390194.1 RNase adapter RapZ -
STREPSUIS_RS04190 803114..804088 + 975 WP_002937257.1 YvcK family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(6-87)

Antitoxin

Protein of unknown function DUF6290

(1-71)


Sequences

Toxin        


Download         Length: 90 a.a.        Molecular weight: 10437.49 Da        Isoelectric Point: 10.3916

>T288911 WP_011922754.1 NZ_LR738722:799648-799917 [Streptococcus suis]
MAYKLVLSDDALKQLKKMDRHVGMMLAKDLKKRLDGLENPRQFGKALVGDYKGLWRYRVGNYRVICDIIDNKMVILALEI
GHRKEIYKK

Download         Length: 270 bp

Antitoxin


Download         Length: 76 a.a.        Molecular weight: 8450.51 Da        Isoelectric Point: 4.1589

>AT288911 WP_002938604.1 NZ_LR738722:799431-799658 [Streptococcus suis]
MGIVSLRLNDAEEEIFRSYAIHTGKSLSELFKTALAEQIEDQLDYEIGIKALKKFQENPVTHSIDDVLAELEDGL

Download         Length: 228 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A126UKS2

Antitoxin

Source ID Structure
AlphaFold DB A0A140EXF0

References