288879

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 891330..891859 Replicon chromosome
Accession NZ_LR735432
Organism Staphylococcus epidermidis strain none isolate Se_RP62a-WT

Toxin (Protein)


Gene name mazF Uniprot ID Q5HME7
Locus tag GOZ24_RS04305 Protein ID WP_001829891.1
Coordinates 891497..891859 (+) Length 121 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID Q5HME6
Locus tag GOZ24_RS04300 Protein ID WP_001829931.1
Coordinates 891330..891500 (+) Length 57 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GOZ24_RS04275 887154..887633 + 480 WP_010959254.1 PH domain-containing protein -
GOZ24_RS04280 887626..889131 + 1506 WP_002457110.1 PH domain-containing protein -
GOZ24_RS04285 889118..889627 + 510 WP_002457109.1 PH domain-containing protein -
GOZ24_RS04290 889675..890028 + 354 WP_002457108.1 holo-ACP synthase -
GOZ24_RS04295 890095..891243 + 1149 WP_002457107.1 alanine racemase -
GOZ24_RS04300 891330..891500 + 171 WP_001829931.1 type II toxin-antitoxin system antitoxin MazE Antitoxin
GOZ24_RS04305 891497..891859 + 363 WP_001829891.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin
GOZ24_RS04310 892204..893205 + 1002 WP_001829902.1 PP2C family protein-serine/threonine phosphatase -
GOZ24_RS04315 893305..893631 + 327 WP_001829952.1 anti-sigma factor antagonist -
GOZ24_RS04320 893633..894112 + 480 WP_001829903.1 anti-sigma B factor RsbW -
GOZ24_RS04325 894087..894857 + 771 WP_002440602.1 RNA polymerase sigma factor SigB -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(1-112)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 121 a.a.        Molecular weight: 13497.65 Da        Isoelectric Point: 9.9522

>T288879 WP_001829891.1 NZ_LR735432:891497-891859 [Staphylococcus epidermidis]
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTFLSESKMIEVDNALDISLGLNNFDHHKS

Download         Length: 363 bp

Antitoxin


Download         Length: 57 a.a.        Molecular weight: 6289.92 Da        Isoelectric Point: 4.1920

>AT288879 WP_001829931.1 NZ_LR735432:891330-891500 [Staphylococcus epidermidis]
MLSFNQNRNHSLEQSLKEGYAQMADLNLSLATEAFPIECEACDCNESHLISNSKNE

Download         Length: 171 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2G7HWR0

Antitoxin

Source ID Structure
AlphaFold DB A0A0N1EF65

References