Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
Location | 4010638..4011416 | Replicon | chromosome |
Accession | NZ_LR699014 | ||
Organism | Citrobacter werkmanii isolate MGYG-HGUT-02535 |
Toxin (Protein)
Gene name | TacT2 | Uniprot ID | - |
Locus tag | FYC27_RS19520 | Protein ID | WP_096758632.1 |
Coordinates | 4010638..4011126 (-) | Length | 163 a.a. |
Antitoxin (Protein)
Gene name | TacA2 | Uniprot ID | - |
Locus tag | FYC27_RS19525 | Protein ID | WP_096758633.1 |
Coordinates | 4011123..4011416 (-) | Length | 98 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
FYC27_RS19500 | 4005804..4006712 | + | 909 | WP_096758628.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
FYC27_RS19505 | 4007295..4007612 | - | 318 | WP_096758630.1 | hypothetical protein | - |
FYC27_RS19510 | 4007743..4009206 | + | 1464 | WP_096758631.1 | hypothetical protein | - |
FYC27_RS19515 | 4010174..4010353 | + | 180 | Protein_3773 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
FYC27_RS19520 | 4010638..4011126 | - | 489 | WP_096758632.1 | GNAT family N-acetyltransferase | Toxin |
FYC27_RS19525 | 4011123..4011416 | - | 294 | WP_096758633.1 | DUF1778 domain-containing protein | Antitoxin |
FYC27_RS19530 | 4012084..4015338 | - | 3255 | WP_096758634.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Genomic island | - | - | 3999803..4012073 | 12270 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 163 a.a. Molecular weight: 17605.61 Da Isoelectric Point: 7.7294
>T288791 WP_096758632.1 NZ_LR699014:c4011126-4010638 [Citrobacter werkmanii]
MISAPEPLHAGHILTPFCCGVDSMDNWLKQRAMKNQLSGASRTFVCCDDVKVMAYYSLASSAVTTNTAPGRFRRNMPDPI
PVVVLGRLAVDKSLHGQGLGRALMRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPMMLMVTLGDLVG
SV
MISAPEPLHAGHILTPFCCGVDSMDNWLKQRAMKNQLSGASRTFVCCDDVKVMAYYSLASSAVTTNTAPGRFRRNMPDPI
PVVVLGRLAVDKSLHGQGLGRALMRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPMMLMVTLGDLVG
SV
Download Length: 489 bp
Antitoxin
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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