Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) spoIISABC/SpoIISA-SpoIISB
Location 1360215..1361134 Replicon chromosome
Accession NZ_LR698983
Organism Bacillus licheniformis isolate MGYG-HGUT-02357

Toxin (Protein)


Gene name spoIISA Uniprot ID T5HIF3
Locus tag FX000_RS07005 Protein ID WP_003180879.1
Coordinates 1360388..1361134 (-) Length 249 a.a.

Antitoxin (Protein)


Gene name spoIISB Uniprot ID T5HT37
Locus tag FX000_RS07000 Protein ID WP_003180877.1
Coordinates 1360215..1360388 (-) Length 58 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FX000_RS06980 1355640..1356737 + 1098 WP_003180867.1 mannonate dehydratase -
FX000_RS06985 1356713..1357561 + 849 WP_009328728.1 SDR family oxidoreductase -
FX000_RS06990 1357588..1358601 + 1014 WP_003180872.1 zinc-binding alcohol dehydrogenase family protein -
FX000_RS06995 1358654..1359925 + 1272 WP_011197811.1 MFS transporter -
FX000_RS07000 1360215..1360388 - 174 WP_003180877.1 type II toxin-antitoxin system SpoIISB family antitoxin Antitoxin
FX000_RS07005 1360388..1361134 - 747 WP_003180879.1 type II toxin-antitoxin system SpoIISA family toxin Toxin
FX000_RS07010 1361245..1362243 - 999 WP_009328723.1 inorganic phosphate transporter -
FX000_RS07015 1362256..1362873 - 618 WP_003180884.1 DUF47 domain-containing protein -
FX000_RS07020 1363205..1364962 + 1758 WP_061565952.1 gamma-glutamyltransferase -
FX000_RS07025 1365091..1365735 + 645 WP_009328721.1 YesL family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin SpoIISA, type II toxin-antitoxin system

(3-238)

Antitoxin

Antitoxin SpoIISB

(1-57)


Sequences

Toxin        


Download         Length: 249 a.a.        Molecular weight: 29391.80 Da        Isoelectric Point: 4.5367

>T288704 WP_003180879.1 NZ_LR698983:c1361134-1360388 [Bacillus licheniformis]
MLLFYQFLVWLIVLALALYVAAVWRFEKQLAEKTVAIRKTWYLLYVIGAVIYWTHDPQSIFTNPLHYLIVAVFFTLTDAF
IFLNAYFKKLGSSELATDTRMLLEENNDLLHTYQNRLKTFQYLLKNEPIHIYYGNIEAYAEGIEKLIKRFAEKMNISAAL
CEYNSEESKDHLLEHMENRFDVQEKLDRKDVYYEENGKMVLIPFSIHDFDYVMKLTSEDLVTEFDYLLFTSLTSIYDLLL
PNEEEGDD

Download         Length: 747 bp

Antitoxin


Download         Length: 58 a.a.        Molecular weight: 6945.04 Da        Isoelectric Point: 10.9186

>AT288704 WP_003180877.1 NZ_LR698983:c1360388-1360215 [Bacillus licheniformis]
MEPAFQQDQESVKKRLAFKMFKRQSKTNIAKYEVSPHTERIFRQNERLIGEYKRKKA

Download         Length: 174 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB T5HIF3

Antitoxin

Source ID Structure
AlphaFold DB T5HT37

References