288695

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) Txe-relE/YoeB-RelB
Location 2747662..2748184 Replicon chromosome
Accession NZ_LR698965
Organism Planococcus massiliensis isolate MGYG-HGUT-01482

Toxin (Protein)


Gene name Txe Uniprot ID -
Locus tag FXZ10_RS13790 Protein ID WP_052652848.1
Coordinates 2747662..2747916 (-) Length 85 a.a.

Antitoxin (Protein)


Gene name relE Uniprot ID A0A098ERB6
Locus tag FXZ10_RS13795 Protein ID WP_052652850.1
Coordinates 2747909..2748184 (-) Length 92 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FXZ10_RS13770 2744154..2744600 - 447 WP_052652840.1 hypothetical protein -
FXZ10_RS13775 2744670..2745944 - 1275 WP_052652842.1 hypothetical protein -
FXZ10_RS13780 2745937..2746851 - 915 WP_052652844.1 hypothetical protein -
FXZ10_RS13785 2747158..2747478 + 321 WP_052652846.1 PH domain-containing protein -
FXZ10_RS13790 2747662..2747916 - 255 WP_052652848.1 Txe/YoeB family addiction module toxin Toxin
FXZ10_RS13795 2747909..2748184 - 276 WP_052652850.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
FXZ10_RS13805 2748364..2749260 - 897 WP_052652852.1 LysR family transcriptional regulator -
FXZ10_RS13810 2749393..2750379 + 987 WP_052652854.1 formimidoylglutamase -
FXZ10_RS13815 2750363..2751568 + 1206 WP_052652856.1 sodium/glutamate symporter -
FXZ10_RS13820 2751618..2752097 - 480 WP_052652858.1 DinB family protein -
FXZ10_RS13825 2752137..2752976 - 840 WP_052652860.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - - 2734698..2748184 13486


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(7-76)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 10405.97 Da        Isoelectric Point: 9.8671

>T288695 WP_052652848.1 NZ_LR698965:c2747916-2747662 [Planococcus massiliensis]
MLKIWADQAWEDYLYWKDNEKKNVKKINRLIKEIERHPFTGLGKPEPLKHEWKGYWSRHITQEHRLVYKVENDSILIAQA
RFHY

Download         Length: 255 bp

Antitoxin


Download         Length: 92 a.a.        Molecular weight: 10060.20 Da        Isoelectric Point: 4.1849

>AT288695 WP_052652850.1 NZ_LR698965:c2748184-2747909 [Planococcus massiliensis]
MSAITATTPTNLRKDLFNILEDVTESNTEVIITLKSGKNAVLISEDELNAYRETAYLMSTRANRERLNDGISQLESGKGI
VRDLIEDDADA

Download         Length: 276 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A098ERB6

References