Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yoeB-relB/YoeB-YefM |
Location | 1995728..1996233 | Replicon | chromosome |
Accession | NZ_LR134477 | ||
Organism | Actinomyces viscosus strain NCTC10951 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | - |
Locus tag | EL340_RS08545 | Protein ID | WP_126414250.1 |
Coordinates | 1995728..1995982 (-) | Length | 85 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | EL340_RS08550 | Protein ID | WP_126414251.1 |
Coordinates | 1995982..1996233 (-) | Length | 84 a.a. |
Genomic Context
Location: 1993026..1995407 (2382 bp)
Type: Others
Protein ID: WP_126414249.1
Type: Others
Protein ID: WP_126414249.1
Location: 1996974..2000828 (3855 bp)
Type: Others
Protein ID: WP_164719363.1
Type: Others
Protein ID: WP_164719363.1
Location: 1992013..1992522 (510 bp)
Type: Others
Protein ID: WP_126414248.1
Type: Others
Protein ID: WP_126414248.1
Location: 1995728..1995982 (255 bp)
Type: Toxin
Protein ID: WP_126414250.1
Type: Toxin
Protein ID: WP_126414250.1
Location: 1995982..1996233 (252 bp)
Type: Antitoxin
Protein ID: WP_126414251.1
Type: Antitoxin
Protein ID: WP_126414251.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
EL340_RS08530 | 1992013..1992522 | - | 510 | WP_126414248.1 | DUF1877 domain-containing protein | - |
EL340_RS08535 | 1993026..1995407 | + | 2382 | WP_126414249.1 | exo-alpha-sialidase | - |
EL340_RS08545 | 1995728..1995982 | - | 255 | WP_126414250.1 | Txe/YoeB family addiction module toxin | Toxin |
EL340_RS08550 | 1995982..1996233 | - | 252 | WP_126414251.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
EL340_RS08555 | 1996974..2000828 | + | 3855 | WP_164719363.1 | peptidase | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Genomic island | - | - | 1995728..2004174 | 8446 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.