Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type VII Classification (family/domain) HepT-MntA/HepT(toxin)
Location 1637974..1638805 Replicon chromosome
Accession NZ_LR134321
Organism Shewanella baltica strain NCTC10737

Toxin (Protein)


Gene name hepT Uniprot ID -
Locus tag EL185_RS07080 Protein ID WP_088585313.1
Coordinates 1637974..1638390 (-) Length 139 a.a.

Antitoxin (Protein)


Gene name mntA Uniprot ID -
Locus tag EL185_RS07085 Protein ID WP_126491558.1
Coordinates 1638383..1638805 (-) Length 141 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EL185_RS07060 1633166..1633713 + 548 Protein_1362 sugar transferase -
EL185_RS07065 1634211..1636151 + 1941 WP_126491556.1 polysaccharide biosynthesis protein -
EL185_RS07070 1636226..1637578 + 1353 WP_126491557.1 phosphoglucosamine mutase -
EL185_RS07080 1637974..1638390 - 417 WP_088585313.1 DUF86 domain-containing protein Toxin
EL185_RS07085 1638383..1638805 - 423 WP_126491558.1 nucleotidyltransferase domain-containing protein Antitoxin
EL185_RS07090 1639177..1639437 + 261 WP_115017884.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
EL185_RS07095 1639439..1639786 + 348 WP_126491559.1 type II toxin-antitoxin system RelE/ParE family toxin -
EL185_RS07100 1639998..1641206 + 1209 WP_126491560.1 J domain-containing protein -
EL185_RS07105 1641922..1642161 + 240 WP_126491561.1 CopG family ribbon-helix-helix protein -
EL185_RS07110 1642151..1642435 + 285 WP_126491562.1 type II toxin-antitoxin system RelE/ParE family toxin -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease HepT-like

(12-130)

Antitoxin

Polymerase beta, nucleotidyltransferase

(9-96)


Sequences

Toxin        


Download         Length: 139 a.a.        Molecular weight: 16056.55 Da        Isoelectric Point: 7.3244

>T287670 WP_088585313.1 NZ_LR134321:c1638390-1637974 [Shewanella baltica]
MNDIIINKIATIKRCIKRIQQVYGDGSMFKQDFTLQDSVILNLQRCCEASIDIANHINRQQQLGIPQSSRDSFTLLSQNK
IINQQLADNLKKMVGLRNIAVHDYQELNLDIVVHVVQHHLEDFEQFIEVIKFCPRMSY

Download         Length: 417 bp

Antitoxin


Download         Length: 141 a.a.        Molecular weight: 15859.91 Da        Isoelectric Point: 5.1231

>AT287670 WP_126491558.1 NZ_LR134321:c1638805-1638383 [Shewanella baltica]
MQQLNESIIINLLQDNIPQLRLIYLFGSYAQGTQHRNSDIDIAVLADVTVDNIARWQLAQKLASALDTDVDLVDLRTAST
VLCQQVVTQGKRLWGTRQDDEIFAVKTISMYQHLQAERQAIIDDATAKTIANDHRGRHFE

Download         Length: 423 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References