Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tsbAT/-
Location 1944339..1945115 Replicon chromosome
Accession NZ_LR134093
Organism Staphylococcus aureus strain NCTC11965

Toxin (Protein)


Gene name tsbT Uniprot ID X5E2E6
Locus tag ELZ56_RS09665 Protein ID WP_000031108.1
Coordinates 1944339..1944491 (-) Length 51 a.a.

Antitoxin (Protein)


Gene name tsbA Uniprot ID A0A0D1IYN8
Locus tag ELZ56_RS09670 Protein ID WP_001251219.1
Coordinates 1944516..1945115 (-) Length 200 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ELZ56_RS09650 1940485..1941306 + 822 WP_000669380.1 RluA family pseudouridine synthase -
ELZ56_RS09655 1941762..1943147 - 1386 WP_000116227.1 class II fumarate hydratase -
ELZ56_RS09660 1943343..1943738 - 396 WP_000901019.1 hypothetical protein -
ELZ56_RS09665 1944339..1944491 - 153 WP_000031108.1 hypothetical protein Toxin
ELZ56_RS09670 1944516..1945115 - 600 WP_001251219.1 glucosamine-6-phosphate isomerase Antitoxin
ELZ56_RS09675 1945274..1945744 - 471 WP_000181394.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -
ELZ56_RS09680 1945749..1946876 - 1128 WP_000379980.1 tRNA epoxyqueuosine(34) reductase QueG -
ELZ56_RS09685 1947027..1947749 - 723 WP_000590809.1 amino acid ABC transporter ATP-binding protein -
ELZ56_RS09690 1947742..1949199 - 1458 WP_000649898.1 ABC transporter permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Glucosamine-6-phosphate isomerase

(124-196)


Sequences

Toxin        


Download         Length: 51 a.a.        Molecular weight: 5936.28 Da        Isoelectric Point: 3.8962

>T286784 WP_000031108.1 NZ_LR134093:c1944491-1944339 [Staphylococcus aureus]
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ

Download         Length: 153 bp

Antitoxin


Download         Length: 200 a.a.        Molecular weight: 22357.50 Da        Isoelectric Point: 5.1445

>AT286784 WP_001251219.1 NZ_LR134093:c1945115-1944516 [Staphylococcus aureus]
MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAPVLDELKKNIEKHAVDFSQINILDYDDKKSYFEALGV
PAGQVYPIAYEKDAIELIADKIKTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFLVVTGANKRDVVEKLYQENGK
TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA

Download         Length: 600 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB X5E2E6

Antitoxin

Source ID Structure
AlphaFold DB A0A0D1IYN8

References