Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | shpAB/BrnT-BrnA |
| Location | 4265423..4265999 | Replicon | chromosome |
| Accession | NZ_LR130562 | ||
| Organism | Escherichia coli strain MS14384 isolate MS14384 | ||
Toxin (Protein)
| Gene name | shpA | Uniprot ID | A0A2U2VE01 |
| Locus tag | EW037_RS20625 | Protein ID | WP_001131965.1 |
| Coordinates | 4265712..4265999 (-) | Length | 96 a.a. |
Antitoxin (Protein)
| Gene name | shpB | Uniprot ID | A0A2S5UGC7 |
| Locus tag | EW037_RS20620 | Protein ID | WP_019842999.1 |
| Coordinates | 4265423..4265725 (-) | Length | 101 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A2U2VE01 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A2S5UGC7 |