Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) Hha-TomB/-
Location 4073582..4074201 Replicon chromosome
Accession NZ_LR130543
Organism Klebsiella variicola strain 04153260899A isolate 04153260899A

Toxin (Protein)


Gene name Hha Uniprot ID R8WYV2
Locus tag EW039_RS20155 Protein ID WP_002892050.1
Coordinates 4073983..4074201 (+) Length 73 a.a.

Antitoxin (Protein)


Gene name TomB Uniprot ID A0A1F2MBN7
Locus tag EW039_RS20150 Protein ID WP_008805436.1
Coordinates 4073582..4073956 (+) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EW039_RS20135 4068737..4069930 + 1194 WP_008805438.1 multidrug efflux RND transporter periplasmic adaptor subunit AcrA -
EW039_RS20140 4069953..4073099 + 3147 WP_008805437.1 multidrug efflux RND transporter permease subunit -
EW039_RS20150 4073582..4073956 + 375 WP_008805436.1 Hha toxicity modulator TomB Antitoxin
EW039_RS20155 4073983..4074201 + 219 WP_002892050.1 hemolysin expression modulator Hha Toxin
EW039_RS20160 4074360..4074926 + 567 WP_016160393.1 maltose O-acetyltransferase -
EW039_RS26815 4074898..4075026 - 129 Protein_3886 hypothetical protein -
EW039_RS20165 4075063..4075533 + 471 WP_008805434.1 YlaC family protein -
EW039_RS20170 4075502..4076959 - 1458 WP_008805433.1 PLP-dependent aminotransferase family protein -
EW039_RS20175 4077060..4077758 + 699 WP_023297138.1 GNAT family N-acetyltransferase -
EW039_RS20180 4077755..4077895 - 141 WP_002892018.1 type B 50S ribosomal protein L36 -
EW039_RS20185 4077895..4078158 - 264 WP_008805431.1 type B 50S ribosomal protein L31 -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Haemolysin expression modulating, HHA

(13-69)

Antitoxin

Biofilm formation regulator YbaJ

(1-116)


Sequences

Toxin        


Download         Length: 73 a.a.        Molecular weight: 8628.00 Da        Isoelectric Point: 8.9008

>T286329 WP_002892050.1 NZ_LR130543:4073983-4074201 [Klebsiella variicola]
MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPTSVWKFIR

Download         Length: 219 bp

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 14384.06 Da        Isoelectric Point: 4.8989

>AT286329 WP_008805436.1 NZ_LR130543:4073582-4073956 [Klebsiella variicola]
MDEYSPKRHDIAQLRFLCETLYHDCLANLEESNHGWVNDPTSAVNLQLNELIEHIATFALNYKIKYTEDNKLVAQVDEYL
DDTFTLFSNYGINSTDLQKWKKSGNRLFRCFVNASRENPASLSC

Download         Length: 375 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2P8K6F2

Antitoxin

Source ID Structure
AlphaFold DB A0A1F2MBN7

References