Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 2161505..2162019 Replicon chromosome
Accession NZ_LR130513
Organism Staphylococcus aureus strain BPH2900 isolate BPH2900

Toxin (Protein)


Gene name TsdT Uniprot ID T1YA99
Locus tag EW029_RS11060 Protein ID WP_000581792.1
Coordinates 2161505..2161714 (-) Length 70 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID -
Locus tag EW029_RS11065 Protein ID WP_000138928.1
Coordinates 2161726..2162019 (-) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EW029_RS11040 2157013..2158371 - 1359 WP_000611469.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
EW029_RS11045 2158386..2159456 - 1071 WP_000159632.1 D-alanine--D-alanine ligase -
EW029_RS11050 2159774..2160976 + 1203 WP_001109944.1 rod shape-determining protein RodA -
EW029_RS11055 2161240..2161377 - 138 WP_000828354.1 hypothetical protein -
EW029_RS11060 2161505..2161714 - 210 WP_000581792.1 heavy-metal-associated domain-containing protein Toxin
EW029_RS11065 2161726..2162019 - 294 WP_000138928.1 copper-sensing transcriptional repressor CsoR Antitoxin
EW029_RS11070 2162185..2163669 + 1485 WP_000571551.1 cardiolipin synthase -
EW029_RS11075 2163697..2164344 + 648 WP_001187617.1 HD domain-containing protein -
EW029_RS11085 2164822..2165694 - 873 WP_000725802.1 membrane protein insertase YidC -
EW029_RS11090 2165780..2166421 - 642 WP_000483153.1 thiamine phosphate synthase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Heavy metal-associated domain, HMA

(23-66)

Antitoxin

Metal-sensitive transcriptional repressor

(14-92)


Sequences

Toxin        


Download         Length: 70 a.a.        Molecular weight: 7843.77 Da        Isoelectric Point: 4.1008

>T286156 WP_000581792.1 NZ_LR130513:c2161714-2161505 [Staphylococcus aureus]
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVTVSYETPANLNSIEKEIYDEGYKIVF

Download         Length: 210 bp

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11184.82 Da        Isoelectric Point: 6.2243

>AT286156 WP_000138928.1 NZ_LR130513:c2162019-2161726 [Staphylococcus aureus]
MTEQDIAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVATKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD

Download         Length: 294 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6FF1

Antitoxin

Source ID Structure

References