Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/PemK(toxin)
Location 2331515..2332151 Replicon chromosome
Accession NZ_LR027516
Organism Mycobacterium tuberculosis strain DKC2 isolate Mycobacterium tuberculosis

Toxin (Protein)


Gene name mazF Uniprot ID P0CL62
Locus tag DKC2_RS11285 Protein ID WP_003410654.1
Coordinates 2331741..2332151 (+) Length 137 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID P9WJ84
Locus tag DKC2_RS11280 Protein ID WP_003410651.1
Coordinates 2331515..2331748 (+) Length 78 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DKC2_RS11270 2327365..2327769 - 405 WP_003410645.1 PPOX class F420-dependent oxidoreductase -
DKC2_RS11275 2327853..2331437 - 3585 WP_003410648.1 cobaltochelatase subunit CobN -
DKC2_RS11280 2331515..2331748 + 234 WP_003410651.1 type II toxin-antitoxin system antitoxin MazE7 Antitoxin
DKC2_RS11285 2331741..2332151 + 411 WP_003410654.1 type II toxin-antitoxin system toxin endoribonuclease MazF7 Toxin
DKC2_RS11290 2332135..2333226 + 1092 WP_003900454.1 precorrin-3B synthase -
DKC2_RS11295 2333236..2333862 + 627 WP_003410658.1 precorrin-8X methylmutase -
DKC2_RS11300 2333859..2335385 + 1527 WP_031746400.1 precorrin-2 C(20)-methyltransferase -
DKC2_RS11305 2335331..2336554 - 1224 WP_003901321.1 class I SAM-dependent methyltransferase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(5-110)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 14235.42 Da        Isoelectric Point: 10.6228

>T285960 WP_003410654.1 NZ_LR027516:2331741-2332151 [Mycobacterium tuberculosis]
MAEPRRGDLWLVSLGAARAGEPGKHRPAVVVSVDELLTGIDDELVVVVPVSSSRSRTPLRPPVAPSEGVAADSVAVCRGV
RAVARARLVERLGALKPATMRAIENALTLILGLPTGPERGEAATHSPVRWTGGRDP

Download         Length: 411 bp

Antitoxin


Download         Length: 78 a.a.        Molecular weight: 8450.25 Da        Isoelectric Point: 4.7954

>AT285960 WP_003410651.1 NZ_LR027516:2331515-2331748 [Mycobacterium tuberculosis]
MSTSTTIRVSTQTRDRLAAQARERGISMSALLTELAAQAERQAIFRAEREASHAETTTQAVRDEDREWEGTVGDGLG

Download         Length: 234 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 7DU4
PDB 5WYG
PDB 6A6X

Antitoxin

Source ID Structure
PDB 7DU4
PDB 6A6X
AlphaFold DB A0A7U4BV50

References