Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacT-ataR/DUF1778(antitoxin) |
| Location | 63803..64560 | Replicon | plasmid 2 |
| Accession | NZ_LN890521 | ||
| Organism | Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 | ||
Toxin (Protein)
| Gene name | tacT | Uniprot ID | A0A4U8I7M5 |
| Locus tag | ARC58_RS25360 | Protein ID | WP_000406363.1 |
| Coordinates | 64078..64560 (+) | Length | 161 a.a. |
Antitoxin (Protein)
| Gene name | ataR | Uniprot ID | A0A4U8I6Z6 |
| Locus tag | ARC58_RS25355 | Protein ID | WP_001195099.1 |
| Coordinates | 63803..64087 (+) | Length | 95 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ARC58_RS25330 | 60026..61075 | + | 1050 | WP_001534988.1 | hypothetical protein | - |
| ARC58_RS27170 | 61478..61672 | + | 195 | Protein_72 | DUF4158 domain-containing protein | - |
| ARC58_RS25340 | 62009..62287 | + | 279 | WP_000534855.1 | cloacin | - |
| ARC58_RS25345 | 62272..63234 | - | 963 | WP_000145248.1 | hypothetical protein | - |
| ARC58_RS25350 | 63231..63491 | - | 261 | WP_000929810.1 | hypothetical protein | - |
| ARC58_RS25355 | 63803..64087 | + | 285 | WP_001195099.1 | DUF1778 domain-containing protein | Antitoxin |
| ARC58_RS25360 | 64078..64560 | + | 483 | WP_000406363.1 | GNAT family N-acetyltransferase | Toxin |
| ARC58_RS25365 | 64944..65393 | + | 450 | WP_000750479.1 | hypothetical protein | - |
| ARC58_RS25370 | 65467..66321 | - | 855 | WP_077905131.1 | IS3 family transposase | - |
| ARC58_RS25375 | 66318..66602 | - | 285 | WP_000537154.1 | IS3 family transposase | - |
| ARC58_RS25380 | 66760..67518 | + | 759 | WP_000493752.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | - | 1..98776 | 98776 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 161 a.a. Molecular weight: 20654.05 Da Isoelectric Point: 13.0041
>T285775 WP_000406363.1 NZ_LN890521:64078-64560 [Salmonella enterica subsp. enterica serovar Weltevreden]
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Download Length: 483 bp
Antitoxin
Download Length: 95 a.a. Molecular weight: 12194.55 Da Isoelectric Point: 12.7731
>AT285775 WP_001195099.1 NZ_LN890521:63803-64087 [Salmonella enterica subsp. enterica serovar Weltevreden]
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Download Length: 285 bp
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A4U8I7M5 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A4U8I6Z6 |