Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relE-parD/RelE(toxin)
Location 5927521..5928107 Replicon chromosome
Accession NZ_LN890476
Organism Achromobacter xylosoxidans isolate R4

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag BN2905_RS27390 Protein ID WP_148318248.1
Coordinates 5927805..5928107 (+) Length 101 a.a.

Antitoxin (Protein)


Gene name parD Uniprot ID -
Locus tag BN2905_RS27385 Protein ID WP_155869076.1
Coordinates 5927521..5927808 (+) Length 96 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BN2905_RS27365 5923215..5924138 + 924 WP_155869071.1 ABC transporter permease -
BN2905_RS27370 5924144..5925010 + 867 WP_006385013.1 ABC transporter permease -
BN2905_RS27375 5925068..5926807 + 1740 WP_155869073.1 peptidase M14 -
BN2905_RS27380 5926820..5927257 + 438 WP_006385010.1 acetyltransferase -
BN2905_RS27385 5927521..5927808 + 288 WP_155869076.1 hypothetical protein Antitoxin
BN2905_RS27390 5927805..5928107 + 303 WP_148318248.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
BN2905_RS27395 5928159..5928365 - 207 WP_155869079.1 hypothetical protein -
BN2905_RS27400 5928362..5928937 - 576 WP_155869082.1 GNAT family N-acetyltransferase -
BN2905_RS27405 5929029..5929664 - 636 WP_047991253.1 methyltransferase domain-containing protein -
BN2905_RS27410 5929661..5931211 - 1551 WP_155869085.1 lytic murein transglycosylase -
BN2905_RS27415 5931314..5931976 - 663 WP_155869087.1 hypothetical protein -
BN2905_RS27420 5932140..5933060 + 921 WP_020928537.1 LysR family transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-88)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 101 a.a.        Molecular weight: 11266.82 Da        Isoelectric Point: 5.6016

>T285766 WP_148318248.1 NZ_LN890476:5927805-5928107 [Achromobacter xylosoxidans]
VRALRWTPEAIQDREAIYDFIEADSPVAALMLDELLEQQAGRLIDHPGLGRPGRVAGTRELVAHPNYLLIYDVTNDLVRM
LRVLHAARQWPTPDSSPGNR

Download         Length: 303 bp

Antitoxin


Download         Length: 96 a.a.        Molecular weight: 10747.07 Da        Isoelectric Point: 11.0787

>AT285766 WP_155869076.1 NZ_LN890476:5927521-5927808 [Achromobacter xylosoxidans]
MSDATFTFRVDEALKNEFAMAAKARDRTGAQLLRDFMREYVQQQQEAAQHDAWFRRQVQAGLDSANAGRLASAAEVETKF
AARRAATRRRLATPK

Download         Length: 288 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References