Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relE-parD/RelE(toxin)
Location 5725881..5726467 Replicon chromosome
Accession NZ_LN890335
Organism Achromobacter xylosoxidans isolate AX_NCIMB_11015_WG

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag BN2877_RS26075 Protein ID WP_155866249.1
Coordinates 5726165..5726467 (+) Length 101 a.a.

Antitoxin (Protein)


Gene name parD Uniprot ID -
Locus tag BN2877_RS26070 Protein ID WP_054436906.1
Coordinates 5725881..5726168 (+) Length 96 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BN2877_RS26050 5721580..5722503 + 924 WP_006385014.1 ABC transporter permease -
BN2877_RS26055 5722509..5723375 + 867 WP_006385013.1 ABC transporter permease -
BN2877_RS26060 5723433..5725172 + 1740 WP_155866248.1 peptidase M14 -
BN2877_RS26065 5725185..5725622 + 438 WP_006385010.1 acetyltransferase -
BN2877_RS26070 5725881..5726168 + 288 WP_054436906.1 hypothetical protein Antitoxin
BN2877_RS26075 5726165..5726467 + 303 WP_155866249.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
BN2877_RS26080 5726510..5726779 - 270 WP_155866250.1 ribbon-helix-helix domain-containing protein -
BN2877_RS26085 5727023..5727550 + 528 WP_155866251.1 sigma-70 family RNA polymerase sigma factor -
BN2877_RS26090 5727636..5728592 + 957 WP_155866640.1 FecR domain-containing protein -
BN2877_RS26095 5728852..5731278 + 2427 WP_161800435.1 TonB-dependent receptor -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-90)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 101 a.a.        Molecular weight: 11423.99 Da        Isoelectric Point: 5.6391

>T285763 WP_155866249.1 NZ_LN890335:5726165-5726467 [Achromobacter xylosoxidans]
VRALRWTPEAIRDREAIYDFIEADSPVAALMLDELLEEQAGRPIDHPGLGRPGRVTGTRELVAHPNYLLIYDVTNDLVRM
LRVLHAARQWPTPDPSSERR

Download         Length: 303 bp

Antitoxin


Download         Length: 96 a.a.        Molecular weight: 10747.07 Da        Isoelectric Point: 11.0787

>AT285763 WP_054436906.1 NZ_LN890335:5725881-5726168 [Achromobacter xylosoxidans]
MSDATFTFRVDEALKNEFAMAAKARDRTGAQLLRDFMREYVQQQQEAAQHDAWFRRQVQAGLDSANAGRLAPAAEVETKF
AARRAATRRRLATSK

Download         Length: 288 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References