Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/YafN(antitoxin) |
| Location | 1726301..1726866 | Replicon | chromosome |
| Accession | NZ_HG992742 | ||
| Organism | Vibrio sp. B1ASS3 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | KJB05_RS08170 | Protein ID | WP_182020508.1 |
| Coordinates | 1726579..1726866 (+) | Length | 96 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | U3BLE1 |
| Locus tag | KJB05_RS08165 | Protein ID | WP_000086647.1 |
| Coordinates | 1726301..1726582 (+) | Length | 94 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJB05_RS08130 | 1722194..1722283 | + | 90 | WP_244142900.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08135 (ACOMICROBIO_NCLOACGD_01626) | 1722754..1723356 | + | 603 | WP_208444461.1 | hypothetical protein | - |
| KJB05_RS28605 | 1723720..1724211 | + | 492 | Protein_1544 | ATP-binding protein | - |
| KJB05_RS08145 (ACOMICROBIO_NCLOACGD_01628) | 1724430..1725542 | + | 1113 | WP_208444459.1 | DUF4236 domain-containing protein | - |
| KJB05_RS08150 | 1725557..1725649 | + | 93 | WP_005445734.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08155 (ACOMICROBIO_LOCUS1072) | 1725682..1726086 | + | 405 | WP_244142897.1 | hydrolase | - |
| KJB05_RS08160 | 1726121..1726210 | + | 90 | WP_072828858.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08165 (ACOMICROBIO_LOCUS1073) | 1726301..1726582 | + | 282 | WP_000086647.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| KJB05_RS08170 (ACOMICROBIO_NCLOACGD_01631) | 1726579..1726866 | + | 288 | WP_182020508.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| KJB05_RS08175 (ACOMICROBIO_LOCUS1074) | 1727018..1727476 | + | 459 | WP_038898338.1 | GNAT family N-acetyltransferase | - |
| KJB05_RS28610 | 1727454..1727573 | + | 120 | WP_244142899.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08180 (ACOMICROBIO_NCLOACGD_01633) | 1727577..1727966 | + | 390 | WP_208444457.1 | MAPEG family protein | - |
| KJB05_RS08185 (ACOMICROBIO_NCLOACGD_01634) | 1728044..1728274 | - | 231 | WP_005442035.1 | PAS factor family protein | - |
| KJB05_RS08190 (ACOMICROBIO_LOCUS1075) | 1728696..1729094 | - | 399 | WP_080641587.1 | helix-turn-helix domain-containing protein | - |
| KJB05_RS08195 (ACOMICROBIO_NCLOACGD_01636) | 1729235..1729714 | + | 480 | WP_208444456.1 | ester cyclase | - |
| KJB05_RS08200 (ACOMICROBIO_LOCUS1076) | 1729830..1730492 | + | 663 | WP_208444455.1 | peptidase E | - |
| KJB05_RS08205 (ACOMICROBIO_NCLOACGD_01638) | 1730575..1730991 | + | 417 | WP_244868319.1 | tetratricopeptide repeat protein | - |
| KJB05_RS08210 (ACOMICROBIO_NCLOACGD_01640) | 1731477..1731845 | + | 369 | WP_208444453.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | fos | - | 1630141..1726866 | 96725 | |
| - | flank | IS/Tn | - | - | 1721075..1722085 | 1010 | |
| - | inside | Integron | - | - | 1714014..1726582 | 12568 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|