Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relB-yefM/YoeB-RelB |
| Location | 1716632..1717148 | Replicon | chromosome |
| Accession | NZ_HG992742 | ||
| Organism | Vibrio sp. B1ASS3 | ||
Toxin (Protein)
| Gene name | relB | Uniprot ID | A0A244CLX5 |
| Locus tag | KJB05_RS08090 | Protein ID | WP_069509627.1 |
| Coordinates | 1716879..1717148 (+) | Length | 90 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | - |
| Locus tag | KJB05_RS08085 | Protein ID | WP_208446444.1 |
| Coordinates | 1716632..1716886 (+) | Length | 85 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJB05_RS08030 | 1711795..1711905 | - | 111 | WP_017822022.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08035 (ACOMICROBIO_NCLOACGD_01608) | 1711902..1712261 | - | 360 | WP_208446552.1 | hypothetical protein | - |
| KJB05_RS08040 (ACOMICROBIO_LOCUS1065) | 1712465..1713999 | + | 1535 | WP_208446524.1 | IS3 family transposase | - |
| KJB05_RS08045 (ACOMICROBIO_NCLOACGD_01611) | 1714011..1714208 | + | 198 | WP_208446447.1 | hypothetical protein | - |
| KJB05_RS28595 | 1714226..1714315 | + | 90 | Protein_1525 | DUF3265 domain-containing protein | - |
| KJB05_RS08050 (ACOMICROBIO_NCLOACGD_01612) | 1714345..1714644 | + | 300 | WP_033006601.1 | hypothetical protein | - |
| KJB05_RS08055 | 1714674..1714763 | + | 90 | WP_072615037.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08060 (ACOMICROBIO_NCLOACGD_01613) | 1714893..1715204 | + | 312 | WP_213053110.1 | hypothetical protein | - |
| KJB05_RS08065 | 1715219..1715311 | + | 93 | WP_075111289.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08070 (ACOMICROBIO_NCLOACGD_01614) | 1715337..1715846 | + | 510 | WP_208446445.1 | DUF4303 domain-containing protein | - |
| KJB05_RS08075 | 1715869..1715961 | + | 93 | WP_086375043.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08080 (ACOMICROBIO_LOCUS1066) | 1715993..1716304 | + | 312 | WP_244142989.1 | hypothetical protein | - |
| KJB05_RS08085 (ACOMICROBIO_LOCUS1067) | 1716632..1716886 | + | 255 | WP_208446444.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
| KJB05_RS08090 (ACOMICROBIO_NCLOACGD_01617) | 1716879..1717148 | + | 270 | WP_069509627.1 | Txe/YoeB family addiction module toxin | Toxin |
| KJB05_RS08095 (ACOMICROBIO_NCLOACGD_01618) | 1717410..1717721 | + | 312 | WP_213053110.1 | hypothetical protein | - |
| KJB05_RS08100 | 1717736..1717828 | + | 93 | WP_075111289.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08105 | 1718304..1718396 | + | 93 | WP_079866500.1 | DUF3265 domain-containing protein | - |
| KJB05_RS08110 (ACOMICROBIO_NCLOACGD_01620) | 1718430..1718786 | + | 357 | WP_208446443.1 | hypothetical protein | - |
| KJB05_RS08115 (ACOMICROBIO_NCLOACGD_01621) | 1718789..1719970 | + | 1182 | WP_191116413.1 | PcfJ domain-containing protein | - |
| KJB05_RS08120 (ACOMICROBIO_LOCUS1068) | 1720113..1720517 | + | 405 | WP_244868318.1 | hydrolase | - |
| KJB05_RS08125 (ACOMICROBIO_LOCUS1070) | 1720551..1722085 | + | 1535 | WP_208446524.1 | IS3 family transposase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | fos | - | 1630141..1726866 | 96725 | |
| - | inside | IScluster/Tn | - | - | 1696123..1713999 | 17876 | |
| - | flank | IS/Tn | - | - | 1721075..1722085 | 1010 | |
| - | inside | Integron | - | - | 1714014..1726582 | 12568 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|