Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4679954..4680323 Replicon chromosome
Accession NZ_HG992341
Organism Xanthomonas arboricola pv. corylina strain CFBP 1159

Toxin (Protein)


Gene name EcnB Uniprot ID A0A0B2CMD0
Locus tag P3C48_RS19955 Protein ID WP_016904515.1
Coordinates 4679954..4680088 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID V7Z8F2
Locus tag P3C48_RS19960 Protein ID WP_006451340.1
Coordinates 4680171..4680323 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P3C48_RS19940 (CFBP1159_39510) 4677021..4677965 - 945 WP_039512622.1 MBL fold metallo-hydrolase -
P3C48_RS19945 (CFBP1159_39520) 4678023..4679312 - 1290 WP_039814994.1 tryptophan--tRNA ligase -
P3C48_RS19950 (CFBP1159_39530) 4679494..4679703 - 210 WP_039512625.1 CsbD family protein -
P3C48_RS19955 (CFBP1159_39540) 4679954..4680088 - 135 WP_016904515.1 entericidin A/B family lipoprotein Toxin
P3C48_RS19960 (CFBP1159_39550) 4680171..4680323 - 153 WP_006451340.1 entericidin A/B family lipoprotein Antitoxin
P3C48_RS19965 (CFBP1159_39560) 4680433..4681356 - 924 WP_039512664.1 arginase -
P3C48_RS19970 (CFBP1159_39570) 4681832..4682284 + 453 WP_275548201.1 roadblock/LC7 domain-containing protein -
P3C48_RS19975 (CFBP1159_39580) 4682348..4682707 + 360 WP_016904518.1 hypothetical protein -
P3C48_RS19980 (CFBP1159_39590) 4682802..4683719 + 918 WP_039814989.1 hypothetical protein -
P3C48_RS19985 (CFBP1159_39600) 4683716..4684258 + 543 WP_016904520.1 GTPase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4443.26 Da        Isoelectric Point: 9.3487

>T285264 WP_016904515.1 NZ_HG992341:c4680088-4679954 [Xanthomonas arboricola pv. corylina]
MKRAIVLLVLSVLSVGMLSGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5168.11 Da        Isoelectric Point: 8.2782

>AT285264 WP_006451340.1 NZ_HG992341:c4680323-4680171 [Xanthomonas arboricola pv. corylina]
MKRLLTLMVLGLFSAGVMTGCNTMAGAGKDMQGAGEKVEKKADNCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0B2CMD0

Antitoxin

Source ID Structure
AlphaFold DB A0A2N7V051

References