285261

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4864945..4865314 Replicon chromosome
Accession NZ_HG992338
Organism Xanthomonas arboricola pv. corylina strain 301 isolate 301

Toxin (Protein)


Gene name EcnB Uniprot ID A0A0B2CMD0
Locus tag P3C56_RS20925 Protein ID WP_016904515.1
Coordinates 4864945..4865079 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID V7Z8F2
Locus tag P3C56_RS20930 Protein ID WP_006451340.1
Coordinates 4865162..4865314 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P3C56_RS20910 (XAC301_41590) 4862012..4862956 - 945 WP_039512622.1 MBL fold metallo-hydrolase -
P3C56_RS20915 (XAC301_41600) 4863014..4864303 - 1290 WP_039814994.1 tryptophan--tRNA ligase -
P3C56_RS20920 (XAC301_41610) 4864485..4864694 - 210 WP_039512625.1 CsbD family protein -
P3C56_RS20925 (XAC301_41620) 4864945..4865079 - 135 WP_016904515.1 entericidin A/B family lipoprotein Toxin
P3C56_RS20930 (XAC301_41630) 4865162..4865314 - 153 WP_006451340.1 entericidin A/B family lipoprotein Antitoxin
P3C56_RS20935 (XAC301_41640) 4865424..4866347 - 924 WP_039512664.1 arginase -
P3C56_RS20940 (XAC301_41650) 4866823..4867275 + 453 WP_275548201.1 roadblock/LC7 domain-containing protein -
P3C56_RS20945 (XAC301_41660) 4867339..4867698 + 360 WP_016904518.1 hypothetical protein -
P3C56_RS20950 (XAC301_41670) 4867793..4868710 + 918 WP_039814989.1 hypothetical protein -
P3C56_RS20955 (XAC301_41680) 4868707..4869249 + 543 WP_016904520.1 GTPase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4443.26 Da        Isoelectric Point: 9.3487

>T285261 WP_016904515.1 NZ_HG992338:c4865079-4864945 [Xanthomonas arboricola pv. corylina]
MKRAIVLLVLSVLSVGMLSGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5168.11 Da        Isoelectric Point: 8.2782

>AT285261 WP_006451340.1 NZ_HG992338:c4865314-4865162 [Xanthomonas arboricola pv. corylina]
MKRLLTLMVLGLFSAGVMTGCNTMAGAGKDMQGAGEKVEKKADNCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0B2CMD0

Antitoxin

Source ID Structure
AlphaFold DB A0A2N7V051

References