Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | FicTA/Fic(toxin) |
Location | 2300251..2301019 | Replicon | chromosome |
Accession | NZ_HG969192 | ||
Organism | Bartonella tribocorum strain BM1374166 |
Toxin (Protein)
Gene name | VbhT | Uniprot ID | A9IYH2 |
Locus tag | BM1374166_RS10270 | Protein ID | WP_012232419.1 |
Coordinates | 2300251..2300844 (-) | Length | 198 a.a. |
Antitoxin (Protein)
Gene name | VbhA | Uniprot ID | A9IYH4 |
Locus tag | BM1374166_RS10275 | Protein ID | WP_012232420.1 |
Coordinates | 2300831..2301019 (-) | Length | 63 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BM1374166_RS10235 | 2295740..2296927 | + | 1188 | WP_012232414.1 | type IV secretion system protein VirB10 | - |
BM1374166_RS10240 | 2296991..2298043 | + | 1053 | WP_038474261.1 | P-type DNA transfer ATPase VirB11 | - |
BM1374166_RS10245 | 2298192..2298596 | + | 405 | WP_012232416.1 | EexN family lipoprotein | - |
BM1374166_RS10255 | 2298880..2299284 | + | 405 | WP_012232417.1 | EexN family lipoprotein | - |
BM1374166_RS10260 | 2299570..2299950 | + | 381 | WP_012232418.1 | EexN family lipoprotein | - |
BM1374166_RS10270 | 2300251..2300844 | - | 594 | WP_012232419.1 | Fic family protein | Toxin |
BM1374166_RS10275 | 2300831..2301019 | - | 189 | WP_012232420.1 | antitoxin VbhA family protein | Antitoxin |
BM1374166_RS10280 | 2301216..2301464 | - | 249 | WP_012232421.1 | HigA family addiction module antidote protein | - |
BM1374166_RS10285 | 2301508..2301778 | - | 271 | Protein_1936 | type II toxin-antitoxin system RelE/ParE family toxin | - |
BM1374166_RS13055 | 2301830..2301997 | - | 168 | WP_158305317.1 | hypothetical protein | - |
BM1374166_RS10295 | 2302258..2303619 | - | 1362 | WP_012232423.1 | phosphoglucosamine mutase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 198 a.a. Molecular weight: 22606.42 Da Isoelectric Point: 6.5008
>T285257 WP_012232419.1 NZ_HG969192:c2300844-2300251 [Bartonella tribocorum]
VEKYKGGGDPYTDPKTGVMYNRFEIQDKTALERVESTFAYVRSFELMRAATGGKFDLDHMKEIHRKLFGDVYEWAGEIRS
IDIAKGNSMFASYHQIESYTPKITQQLAKEQYLRGLDADEFSQRAGYYMGELNALHPFREGNGRTLREFMGQLAREAGYN
INWDGITREEMTKASIAAHFGNSEHLSVLIRQNLNLL
VEKYKGGGDPYTDPKTGVMYNRFEIQDKTALERVESTFAYVRSFELMRAATGGKFDLDHMKEIHRKLFGDVYEWAGEIRS
IDIAKGNSMFASYHQIESYTPKITQQLAKEQYLRGLDADEFSQRAGYYMGELNALHPFREGNGRTLREFMGQLAREAGYN
INWDGITREEMTKASIAAHFGNSEHLSVLIRQNLNLL
Download Length: 594 bp
Antitoxin
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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