Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazF-pemI/MazF(toxin)
Location 231918..232554 Replicon chromosome
Accession NZ_CP128454
Organism Geobacillus stearothermophilus strain EF60063

Toxin (Protein)


Gene name mazF Uniprot ID L7ZVP1
Locus tag QT236_RS01260 Protein ID WP_003253417.1
Coordinates 232204..232554 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name pemI Uniprot ID A0A087LE06
Locus tag QT236_RS01255 Protein ID WP_033010302.1
Coordinates 231918..232199 (+) Length 94 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QT236_RS01235 (QT236_01235) 228170..228787 - 618 WP_033010298.1 rhomboid family intramembrane serine protease -
QT236_RS01240 (QT236_01240) 228906..229295 + 390 WP_033010299.1 holo-ACP synthase -
QT236_RS01245 (QT236_01245) 229375..230394 + 1020 WP_277391990.1 outer membrane lipoprotein carrier protein LolA -
QT236_RS01250 (QT236_01250) 230637..231803 + 1167 WP_033010307.1 alanine racemase -
QT236_RS01255 (QT236_01255) 231918..232199 + 282 WP_033010302.1 hypothetical protein Antitoxin
QT236_RS01260 (QT236_01260) 232204..232554 + 351 WP_003253417.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
QT236_RS01265 (QT236_01265) 233097..235259 + 2163 WP_061580987.1 Tex family protein -
QT236_RS01270 (QT236_01270) 235317..235430 - 114 WP_094239478.1 cortex morphogenetic protein CmpA -
QT236_RS01275 (QT236_01275) 235524..235985 + 462 WP_033016555.1 SprT family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(4-111)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12992.00 Da        Isoelectric Point: 4.8781

>T284574 WP_003253417.1 NZ_CP128454:232204-232554 [Geobacillus stearothermophilus]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTVIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLGLIDF

Download         Length: 351 bp

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10683.20 Da        Isoelectric Point: 7.2027

>AT284574 WP_033010302.1 NZ_CP128454:231918-232199 [Geobacillus stearothermophilus]
VSESGATTEIIVRLPQSLLTELDVLVKQENGNRNELIYQATKMYIRERKKRQIREAMRRGYMEMAKINLSIASEAFHAEY
EADHTVERLVSGG

Download         Length: 282 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U9ERQ4

Antitoxin

Source ID Structure
AlphaFold DB A0A087LE06

References