Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 156403..156889 Replicon chromosome
Accession NZ_CP128410
Organism Streptococcus parasuis strain 7500

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QSV38_RS00795 Protein ID WP_289648835.1
Coordinates 156632..156889 (+) Length 86 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QSV38_RS00790 Protein ID WP_105142535.1
Coordinates 156403..156642 (+) Length 80 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QSV38_RS00770 (QSV38_00770) 151733..152899 + 1167 WP_277837199.1 ATP-grasp domain-containing protein -
QSV38_RS00775 (QSV38_00775) 153191..153580 + 390 WP_289648832.1 NisI/SpaI family lantibiotic immunity lipoprotein -
QSV38_RS00780 (QSV38_00780) 153589..154341 + 753 WP_289648833.1 ABC transporter ATP-binding protein -
QSV38_RS00785 (QSV38_00785) 154342..156312 + 1971 WP_289648834.1 ABC transporter permease -
QSV38_RS00790 (QSV38_00790) 156403..156642 + 240 WP_105142535.1 DUF6290 family protein Antitoxin
QSV38_RS00795 (QSV38_00795) 156632..156889 + 258 WP_289648835.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QSV38_RS00800 (QSV38_00800) 156927..157595 + 669 WP_172036118.1 response regulator transcription factor -
QSV38_RS00805 (QSV38_00805) 157592..158533 + 942 WP_289648836.1 sensor histidine kinase -
QSV38_RS00810 (QSV38_00810) 158642..158800 + 159 WP_289648837.1 hypothetical protein -
QSV38_RS00815 (QSV38_00815) 158841..159488 - 648 WP_289648838.1 hypothetical protein -
QSV38_RS00820 (QSV38_00820) 159584..160654 - 1071 WP_289649361.1 tyrosine recombinase XerS -
QSV38_RS00825 (QSV38_00825) 160896..161672 - 777 WP_289648839.1 EAL domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-75)

Antitoxin

Protein of unknown function DUF6290

(1-75)


Sequences

Toxin        


Download         Length: 86 a.a.        Molecular weight: 9866.57 Da        Isoelectric Point: 10.6981

>T284548 WP_289648835.1 NZ_CP128410:156632-156889 [Streptococcus parasuis]
MSYKVILSARVQKQIQKMDKTAASLILRYLYKHIDGCDNPRQYGIALTANRSGQWRYRIGNYRVIVSIEDNKLIMTSIKM
RNGSL

Download         Length: 258 bp

Antitoxin


Download         Length: 80 a.a.        Molecular weight: 8763.02 Da        Isoelectric Point: 3.8548

>AT284548 WP_105142535.1 NZ_CP128410:156403-156642 [Streptococcus parasuis]
MAAITLKVSEQDKLFMQAMAKFEGVSLSELIRTKTLAALEDEYDARVADIAWAEYQADLANGIEPITLEQMAEELGIEL

Download         Length: 240 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References