284041

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type IV Classification (family/domain) abiEi-abiEii/AbiEii-AbiEi
Location 3115580..3117354 Replicon chromosome
Accession NZ_CP127277
Organism Mycobacterium tuberculosis strain 25421

Toxin (Protein)


Gene name abiEi Uniprot ID P71626
Locus tag QRF07_RS14855 Protein ID WP_003414409.1
Coordinates 3115580..3116464 (-) Length 295 a.a.

Antitoxin (Protein)


Gene name abiEii Uniprot ID P71625
Locus tag QRF07_RS14860 Protein ID WP_003414414.1
Coordinates 3116467..3117354 (-) Length 296 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QRF07_RS14835 (QRF07_14835) 3110844..3111218 - 375 WP_003414296.1 type III-A CRISPR-associated protein Csm2 -
QRF07_RS14840 (QRF07_14840) 3111215..3113644 - 2430 WP_003911999.1 type III-A CRISPR-associated protein Cas10/Csm1 -
QRF07_RS14845 (QRF07_14845) 3113641..3114429 - 789 WP_003917092.1 CRISPR-associated endoribonuclease Cas6 -
QRF07_RS14850 (QRF07_14850) 3114763..3115308 - 546 WP_014584866.1 DUF1802 family protein -
QRF07_RS14855 (QRF07_14855) 3115580..3116464 - 885 WP_003414409.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
QRF07_RS14860 (QRF07_14860) 3116467..3117354 - 888 WP_003414414.1 type IV toxin-antitoxin system AbiEi family antitoxin Antitoxin
QRF07_RS14865 (QRF07_14865) 3117659..3118204 - 546 WP_003910939.1 DUF1802 family protein -
QRF07_RS14870 (QRF07_14870) 3118201..3118470 - 270 WP_003414489.1 DUF2277 family protein -
QRF07_RS14875 (QRF07_14875) 3118491..3118883 - 393 WP_003414492.1 type II toxin-antitoxin system VapC family toxin -
QRF07_RS14880 (QRF07_14880) 3118880..3119095 - 216 WP_003414495.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
QRF07_RS14885 (QRF07_14885) 3119142..3119891 + 750 WP_003902358.1 enoyl-CoA hydratase -
QRF07_RS14890 (QRF07_14890) 3119970..3121052 - 1083 WP_003414499.1 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.



Sequences


Toxin        


Download         Length: 295 a.a.        Molecular weight: 33056.72 Da        Isoelectric Point: 7.1520

>T284041 WP_003414409.1 NZ_CP127277:c3116464-3115580 [Mycobacterium tuberculosis]
VAGLTRALVARHALGRAEAYDAALLDVAQDHLLYLLSQTVQFGDNRLVFKGGTSLRKCRLGNVGRFSTDLDFSAPDDEVV
LEVCELIDGARVGGFEFGVQSTRGDGRHWQLRVRHTELGEPRIVASVEFARRPLALPSELLAFIQLPIHKAYGFGLPTLP
VVAEAEACAEKLARYRRVALARDLYDLNHFASRTIDEPLVRRLWVLKVWGDVVDDRRGTRPLRVEDVLAARSEHDFQPDS
IGVLTRPVAMAAWEARVRKRFAFLTDLDADEQRWAACDERHRREVENALAVLRS

Download         Length: 885 bp


Antitoxin


Download         Length: 296 a.a.        Molecular weight: 32315.19 Da        Isoelectric Point: 9.4723

>AT284041 WP_003414414.1 NZ_CP127277:c3117354-3116467 [Mycobacterium tuberculosis]
VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGEAAI
SDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPAL
LVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE
PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA

Download         Length: 888 bp


Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
PDB 6Y56


Antitoxin

Source ID Structure
AlphaFold DB A0A829CBU9

References