Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 1230297..1230928 Replicon chromosome
Accession NZ_CP127277
Organism Mycobacterium tuberculosis strain 25421

Toxin (Protein)


Gene name mazF Uniprot ID A0A7U4F9D0
Locus tag QRF07_RS05890 Protein ID WP_003405820.1
Coordinates 1230297..1230608 (-) Length 104 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G0TGZ7
Locus tag QRF07_RS05895 Protein ID WP_003405836.1
Coordinates 1230608..1230928 (-) Length 107 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QRF07_RS05870 (QRF07_05870) 1225778..1227202 - 1425 WP_003405805.1 class II fumarate hydratase -
QRF07_RS05875 (QRF07_05875) 1227233..1228321 - 1089 WP_003898726.1 class II fructose-bisphosphatase -
QRF07_RS05880 (QRF07_05880) 1228377..1229021 + 645 WP_003915494.1 DUF4245 domain-containing protein -
QRF07_RS05885 (QRF07_05885) 1229028..1230185 - 1158 WP_003898727.1 AI-2E family transporter -
QRF07_RS05890 (QRF07_05890) 1230297..1230608 - 312 WP_003405820.1 type II toxin-antitoxin system toxin endoribonuclease MazF3 Toxin
QRF07_RS05895 (QRF07_05895) 1230608..1230928 - 321 WP_003405836.1 type II toxin-antitoxin system antitoxin MazE3 Antitoxin
QRF07_RS05900 (QRF07_05900) 1230938..1232474 + 1537 Protein_1162 carboxylesterase/lipase family protein -
QRF07_RS05905 (QRF07_05905) 1232481..1233593 - 1113 WP_003405840.1 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase -
QRF07_RS05910 (QRF07_05910) 1233603..1233860 - 258 WP_003405844.1 exodeoxyribonuclease VII small subunit -
QRF07_RS05915 (QRF07_05915) 1233850..1235097 - 1248 WP_003405846.1 exodeoxyribonuclease VII large subunit -
QRF07_RS05920 (QRF07_05920) 1235094..1235732 - 639 WP_003898730.1 lipid droplet-associated protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(8-85)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 104 a.a.        Molecular weight: 11061.82 Da        Isoelectric Point: 4.9371

>T284010 WP_003405820.1 NZ_CP127277:c1230608-1230297 [Mycobacterium tuberculosis]
MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNIQTIPVCDLGRQIGYL
LASQEPALAEAIGNAFDLDWVVA

Download         Length: 312 bp

Antitoxin


Download         Length: 107 a.a.        Molecular weight: 11394.83 Da        Isoelectric Point: 5.1236

>AT284010 WP_003405836.1 NZ_CP127277:c1230928-1230608 [Mycobacterium tuberculosis]
MYLPWGVVLAGGANGFGAGAYQTGTICEVSTQIAVRLPDEIVAFIDDEVRGQHARSRAAVVLRALERERRRRLAERDAEI
LATNTSATGDLDTLAGHCARTALDID

Download         Length: 321 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U4F9D0

Antitoxin

Source ID Structure
AlphaFold DB G0TGZ7

References