283625

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4484438..4484799 Replicon chromosome
Accession NZ_CP127225
Organism Xanthomonas oryzae pv. oryzae strain YNJC

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag QN060_RS20630 Protein ID WP_011257368.1
Coordinates 4484438..4484572 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag QN060_RS20635 Protein ID WP_011407410.1
Coordinates 4484647..4484799 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QN060_RS20615 (QN060_20610) 4481455..4482399 - 945 WP_285956799.1 MBL fold metallo-hydrolase -
QN060_RS20620 (QN060_20615) 4482530..4483819 - 1290 WP_024744479.1 tryptophan--tRNA ligase -
QN060_RS20625 (QN060_20620) 4483988..4484197 - 210 WP_053503274.1 CsbD family protein -
QN060_RS20630 (QN060_20625) 4484438..4484572 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
QN060_RS20635 (QN060_20630) 4484647..4484799 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
QN060_RS20640 (QN060_20635) 4484907..4485830 - 924 WP_103057389.1 arginase -
QN060_RS20645 (QN060_20640) 4486152..4486370 + 219 Protein_3915 hypothetical protein -
QN060_RS20650 (QN060_20645) 4486362..4486825 + 464 Protein_3916 hypothetical protein -
QN060_RS20655 (QN060_20650) 4486822..4487364 + 543 WP_285956800.1 GTPase -
QN060_RS20660 (QN060_20655) 4487845..4488528 + 684 WP_053503272.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T283625 WP_011257368.1 NZ_CP127225:c4484572-4484438 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT283625 WP_011407410.1 NZ_CP127225:c4484799-4484647 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References