Detailed information of TA system TA283479

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): shpA-brnA/BrnT-BrnA
• Location: 2097615..2098161
• Replicon: chromosome
• Accession: NZ_CP126994
• Organism: Acidisoma sp. PAMC 29798

Toxin (Protein)

• Gene name: shpA
• Uniprot ID: -
• Locus tag: QP803_RS10120
• Protein ID: WP_284947635.1
• Coordinates: 2097877..2098161 (-)
• Length: 95 a.a.

Antitoxin (Protein)

• Gene name: brnA
• Uniprot ID: -
• Locus tag: QP803_RS10115
• Protein ID: WP_284947634.1
• Coordinates: 2097615..2097890 (-)
• Length: 92 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
-	2097615..2097890	-	276	-	-	Antitoxin

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Ribonuclease toxin, BrnT, of type II toxin-antitoxin system (6-85)

Antitoxin

• BrnA antitoxin of type II toxin-antitoxin system (20-83)

Sequences

Toxin

Protein

• Length: 95 a.a.
• Molecular weight: 10747.10 Da
• Isoelectric Point: 6.4863

>T283479 WP_284947635.1 NZ_CP126994:c2098161-2097877 [Acidisoma sp. PAMC 29798]
VPRFTWNAAKARSNLLKHGVAFEDAELVWRDPRHLLRFDRIEDGEERWHAIGLAGSVVVLLVAHTDTEDGDIIRLLSARR
ATKAERKAYENDDV

Nucleotide

• Length: 285 bp

Antitoxin

Protein

• Length: 92 a.a.
• Molecular weight: 10165.44 Da
• Isoelectric Point: 7.0133

>AT283479 WP_284947634.1 NZ_CP126994:c2097890-2097615 [Acidisoma sp. PAMC 29798]
MTTSRDQRDRLERLAGAPDATIDTSDIPEVLDWSGAVRGGLYKPLKEAITIRLDADVLAWFKEQVGGGRGYQSEINRVLR
QHIATIARSRD

Nucleotide

• Length: 276 bp