282963

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 402608..402969 Replicon chromosome
Accession NZ_CP126568
Organism Xanthomonas oryzae pv. oryzicola strain HB8

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag QPJ94_RS01800 Protein ID WP_011257368.1
Coordinates 402835..402969 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag QPJ94_RS01795 Protein ID WP_011407410.1
Coordinates 402608..402760 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QPJ94_RS01770 398952..399635 - 684 WP_014505034.1 dTMP kinase -
QPJ94_RS01775 400115..400650 - 536 Protein_336 GTPase -
QPJ94_RS01780 400647..401045 - 399 Protein_337 hypothetical protein -
QPJ94_RS01785 401037..401255 - 219 Protein_338 hypothetical protein -
QPJ94_RS01790 401577..402500 + 924 WP_014505030.1 arginase -
QPJ94_RS01795 402608..402760 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
QPJ94_RS01800 402835..402969 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
QPJ94_RS01805 403212..403421 + 210 WP_011407411.1 CsbD family protein -
QPJ94_RS01810 403590..404879 + 1290 WP_024711517.1 tryptophan--tRNA ligase -
QPJ94_RS01815 405010..405954 + 945 WP_044749698.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T282963 WP_011257368.1 NZ_CP126568:402835-402969 [Xanthomonas oryzae pv. oryzicola]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT282963 WP_011407410.1 NZ_CP126568:402608-402760 [Xanthomonas oryzae pv. oryzicola]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References