282819

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pmenTA/darT(toxin)
Location 521243..522963 Replicon chromosome
Accession NZ_CP126339
Organism Atlantibacter hermannii strain TL13

Toxin (Protein)


Gene name pmenT Uniprot ID -
Locus tag QN094_RS02495 Protein ID WP_185922533.1
Coordinates 521243..521899 (+) Length 219 a.a.

Antitoxin (Protein)


Gene name pmenA Uniprot ID -
Locus tag QN094_RS02500 Protein ID WP_284556022.1
Coordinates 521896..522963 (+) Length 356 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QN094_RS02480 (QN094_02480) 517131..517370 + 240 WP_168404052.1 transcription factor -
QN094_RS02485 (QN094_02485) 517410..519857 + 2448 WP_185922532.1 type I restriction-modification system subunit M -
QN094_RS02490 (QN094_02490) 519857..521230 + 1374 WP_284556424.1 restriction endonuclease subunit S -
QN094_RS02495 (QN094_02495) 521243..521899 + 657 WP_185922533.1 DUF4433 domain-containing protein Toxin
QN094_RS02500 (QN094_02500) 521896..522963 + 1068 WP_284556022.1 macro domain-containing protein Antitoxin
QN094_RS02505 (QN094_02505) 522984..526079 + 3096 WP_284556023.1 type I restriction endonuclease subunit R -
QN094_RS02510 (QN094_02510) 526079..526795 + 717 WP_138361585.1 SprT family zinc-dependent metalloprotease -
QN094_RS02515 (QN094_02515) 527062..527892 - 831 WP_275147784.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

ssDNA thymidine ADP-ribosyltransferase, DarT

(17-217)

Antitoxin

Macro domain

(18-129)


Sequences

Toxin        


Download         Length: 219 a.a.        Molecular weight: 25169.54 Da        Isoelectric Point: 6.5788

>T282819 WP_185922533.1 NZ_CP126339:521243-521899 [Atlantibacter hermannii]
MAYDYSANLNPEKALIWRIVHRDNIPWILDNGLHCGNSLVQAANWINIGNPELIDKRAGHLVPAGTGGTLHDYVPFYFTP
FSPMLMNIHSGRGGITQRPNEEIIILVSSLRHVATQNVPFVFTDSHAYYNWTNYYTRLDDLNQIDWPILQARDFRRDPDD
PAKFERYQAEALIWQHCPITLLGGMICYNDGVRLQLEQWLSQRNLSMPVHARAGWYFS

Download         Length: 657 bp

Antitoxin


Download         Length: 356 a.a.        Molecular weight: 40810.06 Da        Isoelectric Point: 6.1796

>AT282819 WP_284556022.1 NZ_CP126339:521896-522963 [Atlantibacter hermannii]
MMTYTQGNLLDAPVEALVNTVNTVGVMGKGIALMFKERFPGNMKAYALACKQKQVMTGKMFITETGELMGPRWIVNFPTK
QHWRADSRMEWIEDGLQDLRRFLIEEKVQSIAIPPLGAGNGGLNWPDVRVRIESALGDLQDTEILIYEPTEKYQNVAKST
GVKKLTPARAMIAELVRRYWVLGMECSLLEIQKLAWLLQRAIQQHQQEDVLKLRFEAHYYGPYAPNLNHLLNALDGTYLK
AEKRIPDSQPLDVIWFNDREKEHVNLWLNNEAKEWLPALEQVSQLIDGFESPFGLELLATVDWLLTRGECQPTLDSVKEG
LHQWPAGERWASRKTKLFDDKNLQFAINRVMEFHC

Download         Length: 1068 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References