Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE-RHH
Location 3164783..3165315 Replicon chromosome
Accession NZ_CP126307
Organism Bosea vestrisii strain A18/4-2

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QO058_RS15705 Protein ID WP_284167252.1
Coordinates 3165031..3165315 (+) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QO058_RS15700 Protein ID WP_284167251.1
Coordinates 3164783..3165034 (+) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QO058_RS15675 (QO058_15675) 3160664..3160945 + 282 WP_057191987.1 acyl carrier protein -
QO058_RS15680 (QO058_15680) 3161052..3161513 + 462 WP_284167247.1 3-hydroxyacyl-ACP dehydratase FabZ family protein -
QO058_RS15685 (QO058_15685) 3161515..3162645 + 1131 WP_284167248.1 beta-ketoacyl-ACP synthase -
QO058_RS15690 (QO058_15690) 3162657..3163940 + 1284 WP_284167249.1 beta-ketoacyl-ACP synthase -
QO058_RS15695 (QO058_15695) 3163937..3164683 + 747 WP_284167250.1 SDR family oxidoreductase -
QO058_RS15700 (QO058_15700) 3164783..3165034 + 252 WP_284167251.1 ribbon-helix-helix protein, CopG family Antitoxin
QO058_RS15705 (QO058_15705) 3165031..3165315 + 285 WP_284167252.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QO058_RS15710 (QO058_15710) 3165329..3166351 + 1023 WP_284167253.1 zinc-binding dehydrogenase -
QO058_RS15715 (QO058_15715) 3166459..3167442 + 984 WP_284172916.1 lipid A biosynthesis lauroyl acyltransferase -
QO058_RS15720 (QO058_15720) 3167512..3168258 + 747 WP_284167254.1 DUF1223 domain-containing protein -
QO058_RS15725 (QO058_15725) 3168287..3168934 - 648 WP_284167255.1 hypothetical protein -
QO058_RS15730 (QO058_15730) 3168936..3169733 - 798 WP_284167256.1 YgcG family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(3-90)

Antitoxin

Ribbon-helix-helix protein, CopG

(5-41)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 10485.16 Da        Isoelectric Point: 10.6125

>T282740 WP_284167252.1 NZ_CP126307:3165031-3165315 [Bosea vestrisii]
MKLVWTARAKADLRAIALYVADFSPTAALALVRRLRSAAAQLVDYPHSGRAGRVEETRELVVAGTSYILPYRVRDGRVEI
LAVLHASRQWPDQL

Download         Length: 285 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9367.43 Da        Isoelectric Point: 4.1849

>AT282740 WP_284167251.1 NZ_CP126307:3164783-3165034 [Bosea vestrisii]
MTAAFTIRLDDETLAKLDALAIDTDRSRNWLAAKAIENYIELNAWQIARIREGISQADRGEFATEAELDAIETELQARID
STR

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References