Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /RES-TIGR02293
Location 1590153..1591069 Replicon chromosome
Accession NZ_CP126169
Organism Rahnella bonaserana strain L46

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag QNM34_RS07175 Protein ID WP_217175011.1
Coordinates 1590153..1590611 (-) Length 153 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag QNM34_RS07180 Protein ID WP_217175012.1
Coordinates 1590608..1591069 (-) Length 154 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QNM34_RS07150 (QNM34_07150) 1585369..1587054 + 1686 WP_284005692.1 choline dehydrogenase -
QNM34_RS07155 (QNM34_07155) 1587143..1587598 + 456 WP_284005694.1 GNAT family N-acetyltransferase -
QNM34_RS07160 (QNM34_07160) 1588195..1589124 - 930 WP_284005696.1 LysR family transcriptional regulator -
QNM34_RS07165 (QNM34_07165) 1589226..1589660 + 435 WP_112291477.1 DMT family transporter -
QNM34_RS07170 (QNM34_07170) 1589664..1590116 + 453 WP_284005698.1 DMT family transporter -
QNM34_RS07175 (QNM34_07175) 1590153..1590611 - 459 WP_217175011.1 RES family NAD+ phosphorylase Toxin
QNM34_RS07180 (QNM34_07180) 1590608..1591069 - 462 WP_217175012.1 DUF2384 domain-containing protein Antitoxin
QNM34_RS07185 (QNM34_07185) 1591420..1592307 + 888 WP_037036097.1 nucleoside-specific channel-forming protein Tsx -
QNM34_RS07190 (QNM34_07190) 1592495..1594090 + 1596 WP_217175013.1 ABC-F family ATPase -
QNM34_RS07195 (QNM34_07195) 1594286..1595047 - 762 WP_217175014.1 molybdopterin-synthase adenylyltransferase MoeB -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(2-140)

Antitoxin

Antitoxin Xre-like, helix-turn-helix domain

(34-95)


Sequences

Toxin        


Download         Length: 153 a.a.        Molecular weight: 16999.50 Da        Isoelectric Point: 4.6873

>T282723 WP_217175011.1 NZ_CP126169:c1590611-1590153 [Rahnella bonaserana]
MKLFRIVQTRHLATAWSGAGAQLYGGRWNPPGRPVVYVTTSISLAILEILVHLQNSMLMRSYTLLSIEVPEDLLDTLEVS
ELASDWRSASPPDSTQRQGDEWLAEGDYVGLKVPSVIVPSEYNVLLNPLHPAFVDLLSSVQREPMIFDPRLQ

Download         Length: 459 bp

Antitoxin


Download         Length: 154 a.a.        Molecular weight: 16556.93 Da        Isoelectric Point: 5.9319

>AT282723 WP_217175012.1 NZ_CP126169:c1591069-1590608 [Rahnella bonaserana]
MNSKISGLSSSLLQEPATPLWQSAGLPASSGISLINAIQKGFPVDSISRLNTELGWPKMVLLEIMGINERNYARRKAGNG
LLKSEESERVARLVRIVDAATDLFEGDRVSALEWFTRPAPALDGSRPLELLSSEAGAVEVSRLIGRLEHGVFS

Download         Length: 462 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References