282690

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 4071917..4072433 Replicon chromosome
Accession NZ_CP126140
Organism Salmonella enterica subsp. enterica serovar Enteritidis strain DSE06

Toxin (Protein)


Gene name relE Uniprot ID B5R9I9
Locus tag QNM21_RS19865 Protein ID WP_000220582.1
Coordinates 4071917..4072201 (-) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID V7ISI8
Locus tag QNM21_RS19870 Protein ID WP_000212724.1
Coordinates 4072191..4072433 (-) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QNM21_RS19850 (4067128) 4067128..4068780 + 1653 WP_000155048.1 alpha,alpha-phosphotrehalase -
QNM21_RS19855 (4069189) 4069189..4071327 + 2139 WP_000187818.1 anaerobic ribonucleoside-triphosphate reductase -
QNM21_RS19860 (4071449) 4071449..4071913 + 465 WP_001268859.1 anaerobic ribonucleoside-triphosphate reductase-activating protein -
QNM21_RS19865 (4071917) 4071917..4072201 - 285 WP_000220582.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QNM21_RS19870 (4072191) 4072191..4072433 - 243 WP_000212724.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
QNM21_RS19875 (4072511) 4072511..4074424 - 1914 WP_001212142.1 BglG family transcription antiterminator -
QNM21_RS19880 (4074441) 4074441..4075181 - 741 WP_000779259.1 KDGP aldolase family protein -
QNM21_RS19885 (4075178) 4075178..4076296 - 1119 WP_001139169.1 DgaE family pyridoxal phosphate-dependent ammonia lyase -
QNM21_RS19890 (4076280) 4076280..4077413 - 1134 WP_000459957.1 amidohydrolase/deacetylase family metallohydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-83)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-80)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 10912.66 Da        Isoelectric Point: 9.6743

>T282690 WP_000220582.1 NZ_CP126140:c4072201-4071917 [Salmonella enterica subsp. enterica serovar Enteritidis]
MTYELEFDPRALKEWHKLGDTVQAQLKKKLADVLLNPRIDSARLNDLPDCYKIKLKSSGYRLVYQVRDDVVIVFVVAVGK
REHSAVYHDANKRL

Download         Length: 285 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 8961.34 Da        Isoelectric Point: 5.0651

>AT282690 WP_000212724.1 NZ_CP126140:c4072433-4072191 [Salmonella enterica subsp. enterica serovar Enteritidis]
MATLNVRLDDKLKNEAYAVLEKLNITPTEAVRLLFQYVAETGRMPVKTVTLSDSEDALIQTVRERLSSPQKGIKVSLDDL

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A656ILJ8

Antitoxin

Source ID Structure
AlphaFold DB A0A5H5JRI5

References