Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/upstrm_HI1419-dnstrm_HI1420
Location 54085..54682 Replicon chromosome
Accession NZ_CP126055
Organism Pasteurella multocida strain P030653/1

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QNN13_RS00365 Protein ID WP_078802155.1
Coordinates 54085..54384 (+) Length 100 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QNN13_RS00370 Protein ID WP_078802156.1
Coordinates 54386..54682 (+) Length 99 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QNN13_RS00325 (QNN13_00325) 49340..49570 + 231 WP_223251317.1 hypothetical protein -
QNN13_RS00330 (QNN13_00330) 49632..50273 - 642 WP_170376553.1 Bro-N domain-containing protein -
QNN13_RS00335 (QNN13_00335) 50528..50791 - 264 WP_071522857.1 hypothetical protein -
QNN13_RS00340 (QNN13_00340) 51010..51390 - 381 WP_075271374.1 type II toxin-antitoxin system PemK/MazF family toxin -
QNN13_RS00345 (QNN13_00345) 51568..51840 + 273 WP_014391457.1 hypothetical protein -
QNN13_RS00350 (QNN13_00350) 51833..52021 - 189 WP_014391458.1 hypothetical protein -
QNN13_RS00360 (QNN13_00360) 53607..53804 - 198 WP_250274084.1 hypothetical protein -
QNN13_RS00365 (QNN13_00365) 54085..54384 + 300 WP_078802155.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QNN13_RS00370 (QNN13_00370) 54386..54682 + 297 WP_078802156.1 putative addiction module antidote protein Antitoxin
QNN13_RS00375 (QNN13_00375) 54776..55432 - 657 WP_078802157.1 XRE family transcriptional regulator -
QNN13_RS00380 (QNN13_00380) 55563..55769 + 207 WP_250274086.1 helix-turn-helix transcriptional regulator -
QNN13_RS00385 (QNN13_00385) 55819..56271 + 453 WP_101750067.1 hypothetical protein -
QNN13_RS00390 (QNN13_00390) 56323..57006 + 684 WP_014390721.1 phage antirepressor KilAC domain-containing protein -
QNN13_RS00395 (QNN13_00395) 57003..57356 + 354 WP_014390722.1 HNH endonuclease signature motif containing protein -
QNN13_RS00400 (QNN13_00400) 57358..58257 + 900 WP_014390723.1 hypothetical protein -
QNN13_RS00405 (QNN13_00405) 58257..58952 + 696 WP_283341484.1 replication protein P -
QNN13_RS00410 (QNN13_00410) 58945..59475 + 531 WP_170356878.1 MT-A70 family methyltransferase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - htpB 39830..144870 105040


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Addiction module killer protein, predicted

(1-98)

Antitoxin

Uncharacterized protein HI1420

(4-90)


Sequences

Toxin        


Download         Length: 100 a.a.        Molecular weight: 11415.35 Da        Isoelectric Point: 10.6963

>T282522 WP_078802155.1 NZ_CP126055:54085-54384 [Pasteurella multocida]
MTIRIKTTERFDSWLRKLKNPRAKMKINARIKRLQFGNFGDLKTVNDGIFEMRIDEGQGYRIYLKNNNSVVVILLCGGDK
STQNKDIKLAKQIAEELGV

Download         Length: 300 bp

Antitoxin


Download         Length: 99 a.a.        Molecular weight: 11054.67 Da        Isoelectric Point: 4.8668

>AT282522 WP_078802156.1 NZ_CP126055:54386-54682 [Pasteurella multocida]
MEQLKDFDIAEHLTTEEEIRLYLNEILQEDNIELILSALGDIARARNISQISRETGISREGLYKALSGKGNPTFATVLKV
MKALNLQFEVKVNNVIHA

Download         Length: 297 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References