Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relE-stbD/ParE-YafN |
| Location | 1521479..1522017 | Replicon | chromosome |
| Accession | NZ_CP125805 | ||
| Organism | Mannheimia bovis strain 39324.S-11 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | QMO40_RS07365 | Protein ID | WP_283385805.1 |
| Coordinates | 1521730..1522017 (+) | Length | 96 a.a. |
Antitoxin (Protein)
| Gene name | stbD | Uniprot ID | - |
| Locus tag | QMO40_RS07360 | Protein ID | WP_283385804.1 |
| Coordinates | 1521479..1521733 (+) | Length | 85 a.a. |
Genomic Context
Location: 1516603..1518066 (1464 bp)
Type: Others
Protein ID: WP_283385800.1
Type: Others
Protein ID: WP_283385800.1
Location: 1518150..1518809 (660 bp)
Type: Others
Protein ID: WP_283385801.1
Type: Others
Protein ID: WP_283385801.1
Location: 1518841..1519776 (936 bp)
Type: Others
Protein ID: WP_283385802.1
Type: Others
Protein ID: WP_283385802.1
Location: 1519787..1521358 (1572 bp)
Type: Others
Protein ID: WP_283385803.1
Type: Others
Protein ID: WP_283385803.1
Location: 1521479..1521733 (255 bp)
Type: Antitoxin
Protein ID: WP_283385804.1
Type: Antitoxin
Protein ID: WP_283385804.1
Location: 1521730..1522017 (288 bp)
Type: Toxin
Protein ID: WP_283385805.1
Type: Toxin
Protein ID: WP_283385805.1
Location: 1522398..1522919 (522 bp)
Type: Others
Protein ID: WP_283385807.1
Type: Others
Protein ID: WP_283385807.1
Location: 1524627..1525715 (1089 bp)
Type: Others
Protein ID: WP_283385809.1
Type: Others
Protein ID: WP_283385809.1
Location: 1525829..1526455 (627 bp)
Type: Others
Protein ID: WP_025236107.1
Type: Others
Protein ID: WP_025236107.1
Location: 1522054..1522287 (234 bp)
Type: Others
Protein ID: WP_283385806.1
Type: Others
Protein ID: WP_283385806.1
Location: 1522985..1524349 (1365 bp)
Type: Others
Protein ID: WP_283385808.1
Type: Others
Protein ID: WP_283385808.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMO40_RS07340 (QMO40_07340) | 1516603..1518066 | + | 1464 | WP_283385800.1 | IMP dehydrogenase | - |
| QMO40_RS07345 (QMO40_07345) | 1518150..1518809 | + | 660 | WP_283385801.1 | HAD family phosphatase | - |
| QMO40_RS07350 (QMO40_07350) | 1518841..1519776 | + | 936 | WP_283385802.1 | DUF2806 domain-containing protein | - |
| QMO40_RS07355 (QMO40_07355) | 1519787..1521358 | + | 1572 | WP_283385803.1 | glutamine-hydrolyzing GMP synthase | - |
| QMO40_RS07360 (QMO40_07360) | 1521479..1521733 | + | 255 | WP_283385804.1 | plasmid stabilization protein | Antitoxin |
| QMO40_RS07365 (QMO40_07365) | 1521730..1522017 | + | 288 | WP_283385805.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QMO40_RS07370 (QMO40_07370) | 1522054..1522287 | - | 234 | WP_283385806.1 | helix-turn-helix transcriptional regulator | - |
| QMO40_RS07375 (QMO40_07375) | 1522398..1522919 | + | 522 | WP_283385807.1 | hypothetical protein | - |
| QMO40_RS07380 (QMO40_07380) | 1522985..1524349 | - | 1365 | WP_283385808.1 | bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU | - |
| QMO40_RS07385 (QMO40_07385) | 1524627..1525715 | + | 1089 | WP_283385809.1 | ionic transporter y4hA | - |
| QMO40_RS07390 (QMO40_07390) | 1525829..1526455 | + | 627 | WP_025236107.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.