282396

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 4046351..4046873 Replicon chromosome
Accession NZ_CP125781
Organism Trabulsiella odontotermitis strain TBY01

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QMG90_RS19170 Protein ID WP_283281283.1
Coordinates 4046351..4046641 (-) Length 97 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QMG90_RS19175 Protein ID WP_054179604.1
Coordinates 4046631..4046873 (-) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QMG90_RS19155 (QMG90_19155) 4041686..4043323 + 1638 WP_283281281.1 alpha,alpha-phosphotrehalase -
QMG90_RS19160 (QMG90_19160) 4043745..4045883 + 2139 WP_283281282.1 anaerobic ribonucleoside-triphosphate reductase -
QMG90_RS19165 (QMG90_19165) 4045883..4046347 + 465 WP_038156163.1 anaerobic ribonucleoside-triphosphate reductase-activating protein -
QMG90_RS19170 (QMG90_19170) 4046351..4046641 - 291 WP_283281283.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QMG90_RS19175 (QMG90_19175) 4046631..4046873 - 243 WP_054179604.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
QMG90_RS19180 (QMG90_19180) 4046969..4048879 - 1911 WP_283281287.1 BglG family transcription antiterminator -
QMG90_RS19185 (QMG90_19185) 4048929..4050080 - 1152 WP_283281288.1 lactonase family protein -
QMG90_RS19190 (QMG90_19190) 4050161..4050901 - 741 WP_283281289.1 KDGP aldolase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-83)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-70)


Sequences

Toxin        


Download         Length: 97 a.a.        Molecular weight: 11133.03 Da        Isoelectric Point: 9.8542

>T282396 WP_283281283.1 NZ_CP125781:c4046641-4046351 [Trabulsiella odontotermitis]
MSYELEFDPRALKEWKKLGSTVRSQFKKKLAEVLVHPHVESARLHDLPDCYKIKLKTAGYRLVYQVREEIVVVMVIAVGK
REKSAVYASADKRLDE

Download         Length: 291 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9111.57 Da        Isoelectric Point: 6.3340

>AT282396 WP_054179604.1 NZ_CP125781:c4046873-4046631 [Trabulsiella odontotermitis]
MATLNVRLDDKLKEEAYAVLDKLNLTPTEAVRLLFQYLAENGRMPVKTVTVSDTEDALLRTVRERLANPQKGIKVRLDEL

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References