Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 2762908..2763547 Replicon chromosome
Accession NZ_CP125669
Organism Acinetobacter sp. KCTC 92772

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag QLH32_RS13220 Protein ID WP_283266571.1
Coordinates 2763152..2763547 (+) Length 132 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag QLH32_RS13215 Protein ID WP_279958600.1
Coordinates 2762908..2763165 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QLH32_RS13200 (QLH32_13200) 2759368..2760858 + 1491 WP_283266570.1 NAD(P)/FAD-dependent oxidoreductase -
QLH32_RS13205 (QLH32_13205) 2760996..2761496 + 501 WP_279958602.1 DUF2059 domain-containing protein -
QLH32_RS13210 (QLH32_13210) 2761548..2762720 - 1173 WP_279958601.1 acyl-CoA dehydrogenase family protein -
QLH32_RS13215 (QLH32_13215) 2762908..2763165 + 258 WP_279958600.1 succinate dehydrogenase assembly factor 2 Antitoxin
QLH32_RS13220 (QLH32_13220) 2763152..2763547 + 396 WP_283266571.1 hypothetical protein Toxin
QLH32_RS13225 (QLH32_13225) 2763754..2763978 + 225 WP_279958598.1 hypothetical protein -
QLH32_RS13230 (QLH32_13230) 2764323..2765399 + 1077 WP_283266572.1 hypothetical protein -
QLH32_RS13235 (QLH32_13235) 2765475..2766056 + 582 WP_283266573.1 rhombosortase -
QLH32_RS13240 (QLH32_13240) 2766237..2768447 + 2211 WP_283266574.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 132 a.a.        Molecular weight: 15748.88 Da        Isoelectric Point: 8.1459

>T282272 WP_283266571.1 NZ_CP125669:2763152-2763547 [Acinetobacter sp. KCTC 92772]
MSTANRVFELQASRFMIVLQLLIFIFLMILLYQLLALGIWLLCLGIMVIAWFRFLQQPQVKRFEHLEDQDWSFEFAVSDL
PIQRRQIVKMIDHHCYVVLYFSASHDKTCIIWWDQLPVTQWKNLKTLVKLC

Download         Length: 396 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10106.51 Da        Isoelectric Point: 4.3705

>AT282272 WP_279958600.1 NZ_CP125669:2762908-2763165 [Acinetobacter sp. KCTC 92772]
MSDEMTLEERKVIYRSRRGLKEIDVYFDPYVKNYYLSADPAEKALFAELVDQEDPDLLDWFMEVGEAPRAEIKEFILKLK
QYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References