282246

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 877002..877365 Replicon chromosome
Accession NZ_CP125657
Organism Xanthomonas campestris strain GBBC 3077

Toxin (Protein)


Gene name EcnB Uniprot ID G0CKD4
Locus tag QMY63_RS03675 Protein ID WP_011270059.1
Coordinates 877231..877365 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID Q8P3Z2
Locus tag QMY63_RS03670 Protein ID WP_011038999.1
Coordinates 877002..877154 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QMY63_RS03640 (QMY63_03640) 872174..872857 - 684 WP_050911792.1 dTMP kinase -
QMY63_RS03645 (QMY63_03645) 873192..873734 - 543 WP_011039004.1 GTPase -
QMY63_RS03650 (QMY63_03650) 873731..874648 - 918 WP_011039003.1 hypothetical protein -
QMY63_RS03655 (QMY63_03655) 874751..875110 - 360 WP_011039002.1 hypothetical protein -
QMY63_RS03660 (QMY63_03660) 875193..875654 - 462 WP_057673529.1 roadblock/LC7 domain-containing protein -
QMY63_RS03665 (QMY63_03665) 875968..876891 + 924 WP_057673597.1 arginase -
QMY63_RS03670 (QMY63_03670) 877002..877154 + 153 WP_011038999.1 entericidin A/B family lipoprotein Antitoxin
QMY63_RS03675 (QMY63_03675) 877231..877365 + 135 WP_011270059.1 entericidin A/B family lipoprotein Toxin
QMY63_RS03680 (QMY63_03680) 877598..877807 + 210 WP_011038998.1 CsbD family protein -
QMY63_RS03685 (QMY63_03685) 877967..879256 + 1290 WP_057673596.1 tryptophan--tRNA ligase -
QMY63_RS03690 (QMY63_03690) 879340..880284 + 945 WP_057673527.1 MBL fold metallo-hydrolase -
QMY63_RS03695 (QMY63_03695) 880449..882101 + 1653 WP_057673525.1 M28 family metallopeptidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4431.27 Da        Isoelectric Point: 9.3487

>T282246 WP_011270059.1 NZ_CP125657:877231-877365 [Xanthomonas campestris]
MKRAIALLVLSMLSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5173.15 Da        Isoelectric Point: 8.2782

>AT282246 WP_011038999.1 NZ_CP125657:877002-877154 [Xanthomonas campestris]
MKRLLTLMVLGLFSAGMMTGCNTMAGAGKDMQGAGDKVEKTADKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H2XDQ0

Antitoxin

Source ID Structure
AlphaFold DB Q8P3Z2

References