Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relB-parE/ParE-RHH |
| Location | 78483..79039 | Replicon | plasmid pRspBT04c |
| Accession | NZ_CP125647 | ||
| Organism | Rhizobium sp. BT04 | ||
Toxin (Protein)
| Gene name | parE | Uniprot ID | - |
| Locus tag | QMO82_RS00440 | Protein ID | WP_183610274.1 |
| Coordinates | 78749..79039 (+) | Length | 97 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | QMO82_RS00435 | Protein ID | WP_183610273.1 |
| Coordinates | 78483..78761 (+) | Length | 93 a.a. |
Genomic Context
Location: 77204..78274 (1071 bp)
Type: Others
Protein ID: WP_183610272.1
Type: Others
Protein ID: WP_183610272.1
Location: 78483..78761 (279 bp)
Type: Antitoxin
Protein ID: WP_183610273.1
Type: Antitoxin
Protein ID: WP_183610273.1
Location: 78749..79039 (291 bp)
Type: Toxin
Protein ID: WP_183610274.1
Type: Toxin
Protein ID: WP_183610274.1
Location: 79203..79634 (432 bp)
Type: Others
Protein ID: WP_183610275.1
Type: Others
Protein ID: WP_183610275.1
Location: 79634..81028 (1395 bp)
Type: Others
Protein ID: WP_183610276.1
Type: Others
Protein ID: WP_183610276.1
Location: 81025..81447 (423 bp)
Type: Others
Protein ID: WP_183610277.1
Type: Others
Protein ID: WP_183610277.1
Location: 81444..82151 (708 bp)
Type: Others
Protein ID: WP_183610278.1
Type: Others
Protein ID: WP_183610278.1
Location: 82148..83143 (996 bp)
Type: Others
Protein ID: WP_183610279.1
Type: Others
Protein ID: WP_183610279.1
Location: 83165..83932 (768 bp)
Type: Others
Protein ID: WP_183610280.1
Type: Others
Protein ID: WP_183610280.1
Location: 73761..74648 (888 bp)
Type: Others
Protein ID: WP_183610269.1
Type: Others
Protein ID: WP_183610269.1
Location: 74740..75969 (1230 bp)
Type: Others
Protein ID: WP_183610270.1
Type: Others
Protein ID: WP_183610270.1
Location: 76027..76980 (954 bp)
Type: Others
Protein ID: WP_183610271.1
Type: Others
Protein ID: WP_183610271.1
Loading, please wait
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMO82_RS00415 (QMO82_000286) | 73761..74648 | - | 888 | WP_183610269.1 | sugar ABC transporter permease | - |
| QMO82_RS00420 (QMO82_000287) | 74740..75969 | - | 1230 | WP_183610270.1 | ABC transporter substrate-binding protein | - |
| QMO82_RS00425 (QMO82_000288) | 76027..76980 | - | 954 | WP_183610271.1 | sugar phosphate isomerase/epimerase | - |
| QMO82_RS00430 (QMO82_000289) | 77204..78274 | + | 1071 | WP_183610272.1 | LacI family DNA-binding transcriptional regulator | - |
| QMO82_RS00435 (QMO82_000290) | 78483..78761 | + | 279 | WP_183610273.1 | CopG family ribbon-helix-helix protein | Antitoxin |
| QMO82_RS00440 (QMO82_000291) | 78749..79039 | + | 291 | WP_183610274.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QMO82_RS00445 (QMO82_000292) | 79203..79634 | + | 432 | WP_183610275.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit | - |
| QMO82_RS00450 (QMO82_000293) | 79634..81028 | + | 1395 | WP_183610276.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| QMO82_RS00455 (QMO82_000294) | 81025..81447 | + | 423 | WP_183610277.1 | acetyl-CoA carboxylase | - |
| QMO82_RS00460 (QMO82_000295) | 81444..82151 | + | 708 | WP_183610278.1 | 5-oxoprolinase subunit PxpB | - |
| QMO82_RS00465 (QMO82_000296) | 82148..83143 | + | 996 | WP_183610279.1 | biotin-dependent carboxyltransferase family protein | - |
| QMO82_RS00470 (QMO82_000297) | 83165..83932 | + | 768 | WP_183610280.1 | 5-oxoprolinase subunit PxpA | - |
Associated MGEs
Loading, please wait
MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | - | 1..274203 | 274203 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.