Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/RHH(antitoxin) |
| Location | 152495..153030 | Replicon | plasmid pRspBT03f |
| Accession | NZ_CP125641 | ||
| Organism | Rhizobium sp. BT03 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | QMO80_RS22590 | Protein ID | WP_283200649.1 |
| Coordinates | 152755..153030 (+) | Length | 92 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | A0A1S1PRZ5 |
| Locus tag | QMO80_RS22585 | Protein ID | WP_049734928.1 |
| Coordinates | 152495..152755 (+) | Length | 87 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMO80_RS22565 (QMO80_004513) | 148457..149338 | - | 882 | WP_283200646.1 | ABC transporter permease | - |
| QMO80_RS22570 (QMO80_004514) | 149350..150168 | - | 819 | WP_283200647.1 | ABC transporter ATP-binding protein | - |
| QMO80_RS22575 (QMO80_004515) | 150263..151276 | - | 1014 | WP_283200648.1 | ABC transporter substrate-binding protein | - |
| QMO80_RS22580 (QMO80_004516) | 151567..152295 | - | 729 | WP_283200777.1 | FadR/GntR family transcriptional regulator | - |
| QMO80_RS22585 (QMO80_004517) | 152495..152755 | + | 261 | WP_049734928.1 | ribbon-helix-helix domain-containing protein | Antitoxin |
| QMO80_RS22590 (QMO80_004518) | 152755..153030 | + | 276 | WP_283200649.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QMO80_RS22595 (QMO80_004519) | 153095..154102 | - | 1008 | WP_283200650.1 | LacI family DNA-binding transcriptional regulator | - |
| QMO80_RS22600 (QMO80_004520) | 154310..155629 | + | 1320 | WP_283200651.1 | alpha-L-fucosidase | - |
| QMO80_RS22605 (QMO80_004521) | 155679..156899 | + | 1221 | WP_283200652.1 | sugar ABC transporter substrate-binding protein | - |
| QMO80_RS22610 (QMO80_004522) | 157000..157926 | + | 927 | WP_283200653.1 | sugar ABC transporter permease | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | - | 1..654550 | 654550 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|