Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacT-ataR/DUF1778(antitoxin)
Location 2314269..2315087 Replicon chromosome
Accession NZ_CP124967
Organism Agrobacterium tumefaciens strain O54/95

Toxin (Protein)


Gene name tacT Uniprot ID -
Locus tag G6L90_RS11495 Protein ID WP_174070414.1
Coordinates 2314269..2314784 (-) Length 172 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag G6L90_RS11500 Protein ID WP_174070412.1
Coordinates 2314788..2315087 (-) Length 100 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G6L90_RS11475 (G6L90_11475) 2311430..2311939 + 510 WP_174070422.1 hypothetical protein -
G6L90_RS11480 (G6L90_11480) 2311936..2312409 + 474 WP_174070420.1 hypothetical protein -
G6L90_RS11485 (G6L90_11485) 2312357..2312878 + 522 WP_174070418.1 hypothetical protein -
G6L90_RS11490 (G6L90_11490) 2312892..2314262 + 1371 WP_174070416.1 thiamine biosynthesis protein ThiF -
G6L90_RS11495 (G6L90_11495) 2314269..2314784 - 516 WP_174070414.1 GNAT family N-acetyltransferase Toxin
G6L90_RS11500 (G6L90_11500) 2314788..2315087 - 300 WP_174070412.1 DUF1778 domain-containing protein Antitoxin
G6L90_RS11505 (G6L90_11505) 2315611..2317266 + 1656 WP_174070788.1 recombinase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(44-143)

Antitoxin

Vibrio phage ICP1, Orf50

(12-87)


Sequences

Toxin        


Download         Length: 172 a.a.        Molecular weight: 18133.83 Da        Isoelectric Point: 6.9578

>T281861 WP_174070414.1 NZ_CP124967:c2314784-2314269 [Agrobacterium tumefaciens]
VALSAPELLTAAHDVSEFSCGTPTLDHWLKTRALSNQQKGFTVVLVVHEAGRVVGYYGLAPTAVVPAILPRSIRTGQPPD
PVPCLLLGQLATDEAWAGQGIGTGLVKHALQRCVQAANLIGGRALMVNAIDDEAARFWQRRGFMSSKDDPLVLFRSIADI
AASFAEAHAPA

Download         Length: 516 bp

Antitoxin


Download         Length: 100 a.a.        Molecular weight: 11120.83 Da        Isoelectric Point: 4.7174

>AT281861 WP_174070412.1 NZ_CP124967:c2315087-2314788 [Agrobacterium tumefaciens]
MATIVERKEYPISMRLPEADVAMIDRAATLRGRSRTDFVRDAAVRAAEDVLMENRLIRMSPEGFAEFMDVLAAPAAPVAE
MVELAQRPAPWETGYEPKR

Download         Length: 300 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References