Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/RelE-Phd |
| Location | 1812467..1812992 | Replicon | chromosome |
| Accession | NZ_CP124863 | ||
| Organism | Streptomyces sp. BPTC-684 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | QIY60_RS07975 | Protein ID | WP_054221840.1 |
| Coordinates | 1812729..1812992 (+) | Length | 88 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | S5UWF1 |
| Locus tag | QIY60_RS07970 | Protein ID | WP_019434848.1 |
| Coordinates | 1812467..1812736 (+) | Length | 90 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QIY60_RS07970 (QIY60_07970) | 1812467..1812736 | + | 270 | WP_019434848.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| QIY60_RS07975 (QIY60_07975) | 1812729..1812992 | + | 264 | WP_054221840.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QIY60_RS07980 (QIY60_07980) | 1813127..1814215 | - | 1089 | WP_283141768.1 | redox-regulated ATPase YchF | - |
| QIY60_RS07985 (QIY60_07985) | 1814465..1815058 | + | 594 | WP_283141769.1 | hypothetical protein | - |
| QIY60_RS07990 (QIY60_07990) | 1815216..1815956 | - | 741 | WP_283141770.1 | ROK family protein | - |
| QIY60_RS07995 (QIY60_07995) | 1816052..1817032 | - | 981 | WP_283141771.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|