Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 2672985..2674573 Replicon chromosome
Accession NZ_CP124827
Organism Klebsiella pneumoniae strain K147

Toxin (Protein)


Gene name hipA Uniprot ID A0A0H3GN97
Locus tag QLG19_RS13140 Protein ID WP_004199851.1
Coordinates 2672985..2674307 (-) Length 441 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID A0A0H3GXD8
Locus tag QLG19_RS13145 Protein ID WP_002904790.1
Coordinates 2674307..2674573 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QLG19_RS13125 (QLG19_13125) 2668050..2670551 + 2502 WP_004199853.1 fimbria/pilus outer membrane usher protein -
QLG19_RS13130 (QLG19_13130) 2670539..2671543 + 1005 WP_004199852.1 fimbrial protein -
QLG19_RS13135 (QLG19_13135) 2671676..2672968 + 1293 WP_002904794.1 glycoside hydrolase family 10 protein -
QLG19_RS13140 (QLG19_13140) 2672985..2674307 - 1323 WP_004199851.1 type II toxin-antitoxin system HipA family toxin Toxin
QLG19_RS13145 (QLG19_13145) 2674307..2674573 - 267 WP_002904790.1 type II toxin-antitoxin system antitoxin HipB Antitoxin
QLG19_RS13150 (QLG19_13150) 2674839..2675165 - 327 WP_002904788.1 hydroxyisourate hydrolase -
QLG19_RS13155 (QLG19_13155) 2675162..2675662 - 501 WP_002904787.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
QLG19_RS13160 (QLG19_13160) 2675640..2677019 - 1380 WP_004199850.1 nucleobase:cation symporter-2 family protein -
QLG19_RS13165 (QLG19_13165) 2677365..2678519 + 1155 WP_002904783.1 FAD-dependent urate hydroxylase HpxO -
QLG19_RS13170 (QLG19_13170) 2678500..2679423 - 924 WP_004199849.1 LysR family hpxDE operon transcriptional regulator HpxR -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(149-402)

Antitoxin

Cro/C1-type helix-turn-helix domain

(16-65)


Sequences

Toxin        


Download         Length: 441 a.a.        Molecular weight: 49128.44 Da        Isoelectric Point: 7.2487

>T281320 WP_004199851.1 NZ_CP124827:c2674307-2672985 [Klebsiella pneumoniae]
MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHYFDNLLPDSPQVRDRIVRRYQ
ARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTLDEAQLTALLTAYQSDIPLGMITSQDDFRISVAGAQEKTAL
LRMGEQWCIPQGATPTTHIIKLPIGEIKQPNATLDLRESVDNEYLCLALARELGLAVPEAEIITTPRIRALAVTRFDRRW
AQEGRVLLRLPQEDLCQAFGLPSAMKYESDGGPGIAAIMTFLLGSSEALKDRYDFMKFMVFQWLTGATDGHAKNFSIYLL
PGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATKGRKTEINAIYPRHFLATAKAVNFPLEQMLAILQEFAGHVP
QAIESARRTLPADFSSHVWQAITENMLKLHARLQQGLQAL

Download         Length: 1323 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9906.27 Da        Isoelectric Point: 8.5912

>AT281320 WP_002904790.1 NZ_CP124827:c2674573-2674307 [Klebsiella pneumoniae]
MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKILQSLGVVMTLNAKAAETAPAP
DNNTDLDW

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GN97

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GXD8

References