280958

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PumAB/COG3657-dnstrm_HI1420
Location 5803897..5804483 Replicon chromosome
Accession NZ_CP124651
Organism Pseudomonas aeruginosa strain 2020CK-00217

Toxin (Protein)


Gene name PumA Uniprot ID G8CP73
Locus tag P7I79_RS27400 Protein ID WP_003120987.1
Coordinates 5804184..5804483 (-) Length 100 a.a.

Antitoxin (Protein)


Gene name PumB Uniprot ID -
Locus tag P7I79_RS27395 Protein ID WP_003448662.1
Coordinates 5803897..5804187 (-) Length 97 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P7I79_RS27380 (P7I79_27380) 5799472..5801367 + 1896 WP_155713823.1 hypothetical protein -
P7I79_RS27385 (P7I79_27385) 5801364..5803340 + 1977 WP_023093671.1 DEAD/DEAH box helicase -
P7I79_RS27390 (P7I79_27390) 5803479..5803814 + 336 WP_022579623.1 hypothetical protein -
P7I79_RS27395 (P7I79_27395) 5803897..5804187 - 291 WP_003448662.1 putative addiction module antidote protein Antitoxin
P7I79_RS27400 (P7I79_27400) 5804184..5804483 - 300 WP_003120987.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
P7I79_RS27405 (P7I79_27405) 5804685..5805809 + 1125 WP_023093672.1 TcpQ domain-containing protein -
P7I79_RS27410 (P7I79_27410) 5805809..5807518 + 1710 WP_023093673.1 PilN family type IVB pilus formation outer membrane protein -
P7I79_RS27415 (P7I79_27415) 5807522..5808847 + 1326 WP_022579625.1 type 4b pilus protein PilO2 -
P7I79_RS27420 (P7I79_27420) 5808837..5809370 + 534 WP_003149521.1 type IV pilus biogenesis protein PilP -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Integrative and Conjugative Element - - 5773392..5861571 88179


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Addiction module killer protein, predicted

(3-96)

Antitoxin

Cro/C1-type helix-turn-helix domain

(47-90)


Sequences

Toxin        


Download         Length: 100 a.a.        Molecular weight: 11133.88 Da        Isoelectric Point: 10.4495

>T280958 WP_003120987.1 NZ_CP124651:c5804483-5804184 [Pseudomonas aeruginosa]
MVEVKQTATFMAWESKLKDRRAKAVIAARIFRLANGLPGDVSPVGQGVSELRIHYGPGYRVYFQQRGTEIVILLCGGDKS
SQARDIEMAKRLANEWRPQ

Download         Length: 300 bp

Antitoxin


Download         Length: 97 a.a.        Molecular weight: 10394.91 Da        Isoelectric Point: 4.7527

>AT280958 WP_003448662.1 NZ_CP124651:c5804187-5803897 [Pseudomonas aeruginosa]
MTEQIYDYDPAQALDSPEAMALFIADALDTGDTAYIAKAMGVVARAKGMTELAKETGLAREQLYKSFSERGNPTLKTMLA
VMRALGVDLTARPHAQ

Download         Length: 291 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB G8CP73

Antitoxin

Source ID Structure

References