Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | /BrnT(toxin) |
Location | 1975427..1975910 | Replicon | chromosome |
Accession | NZ_CP124543 | ||
Organism | Halotia branconii CENA392 |
Toxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | QI031_RS08740 | Protein ID | WP_281484795.1 |
Coordinates | 1975427..1975690 (+) | Length | 88 a.a. |
Antitoxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | QI031_RS08745 | Protein ID | WP_281484796.1 |
Coordinates | 1975680..1975910 (+) | Length | 77 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
QI031_RS08715 (QI031_08715) | 1970946..1971872 | - | 927 | WP_281485965.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
QI031_RS08720 (QI031_08720) | 1971899..1972774 | - | 876 | WP_281484792.1 | lipoyl synthase | - |
QI031_RS08730 (QI031_08730) | 1974526..1974675 | + | 150 | WP_281484793.1 | hypothetical protein | - |
QI031_RS08735 (QI031_08735) | 1974675..1975430 | + | 756 | WP_281484794.1 | PDDEXK nuclease domain-containing protein | - |
QI031_RS08740 (QI031_08740) | 1975427..1975690 | + | 264 | WP_281484795.1 | BrnT family toxin | Toxin |
QI031_RS08745 (QI031_08745) | 1975680..1975910 | + | 231 | WP_281484796.1 | CopG family transcriptional regulator | Antitoxin |
QI031_RS08750 (QI031_08750) | 1975907..1976188 | + | 282 | WP_281484797.1 | type I restriction endonuclease subunit R | - |
QI031_RS08755 (QI031_08755) | 1976320..1976688 | + | 369 | WP_281484798.1 | hypothetical protein | - |
QI031_RS08760 (QI031_08760) | 1976685..1976897 | - | 213 | Protein_1734 | hypothetical protein | - |
QI031_RS08765 (QI031_08765) | 1976964..1977769 | + | 806 | Protein_1735 | IS5 family transposase | - |
QI031_RS08770 (QI031_08770) | 1978371..1979864 | + | 1494 | WP_281484799.1 | VanZ family protein | - |
QI031_RS08775 (QI031_08775) | 1979966..1980721 | - | 756 | WP_281484800.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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