Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2956591..2957062 | Replicon | chromosome |
| Accession | NZ_CP124513 | ||
| Organism | Escherichia coli strain AVS0366 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP86_RS14525 | Protein ID | WP_001303511.1 |
| Coordinates | 2956784..2957062 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP86_RS14520 | Protein ID | WP_001302048.1 |
| Coordinates | 2956591..2956782 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP86_RS14450 (2951658) | 2951658..2951825 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP86_RS14455 (2951836) | 2951836..2952099 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP86_RS14460 (2952101) | 2952101..2952319 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP86_RS14465 (2952321) | 2952321..2952536 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP86_RS14470 (2952537) | 2952537..2952896 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP86_RS14475 (2952893) | 2952893..2953069 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP86_RS14480 (2953062) | 2953062..2953244 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP86_RS14485 (2953373) | 2953373..2953684 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP86_RS14490 (2953677) | 2953677..2953931 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP86_RS14495 (2953928) | 2953928..2954350 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP86_RS14500 (2954391) | 2954391..2955353 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP86_RS14505 (2955376) | 2955376..2955801 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP86_RS14510 (2955798) | 2955798..2956100 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP86_RS14515 (2956199) | 2956199..2956570 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP86_RS14520 (2956591) | 2956591..2956782 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP86_RS14525 (2956784) | 2956784..2957062 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP86_RS14530 (2957354) | 2957354..2957506 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP86_RS14535 (2957518) | 2957518..2957856 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP86_RS14540 (2957845) | 2957845..2958039 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP86_RS14545 (2958606) | 2958606..2958794 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP86_RS14550 (2958791) | 2958791..2958979 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP86_RS14555 (2959075) | 2959075..2961546 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP86_RS14560 (2961608) | 2961608..2961877 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2910744..2970132 | 59388 | |
| - | inside | Prophage | sitABCD | - | 2849355..2970132 | 120777 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|