Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2919856..2920327 | Replicon | chromosome |
| Accession | NZ_CP124506 | ||
| Organism | Escherichia coli strain AVS0750 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP88_RS14460 | Protein ID | WP_001303511.1 |
| Coordinates | 2920049..2920327 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP88_RS14455 | Protein ID | WP_001302048.1 |
| Coordinates | 2919856..2920047 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP88_RS14385 (2914923) | 2914923..2915090 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP88_RS14390 (2915101) | 2915101..2915364 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP88_RS14395 (2915366) | 2915366..2915584 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP88_RS14400 (2915586) | 2915586..2915801 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP88_RS14405 (2915802) | 2915802..2916161 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP88_RS14410 (2916158) | 2916158..2916334 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP88_RS14415 (2916327) | 2916327..2916509 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP88_RS14420 (2916638) | 2916638..2916949 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP88_RS14425 (2916942) | 2916942..2917196 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP88_RS14430 (2917193) | 2917193..2917615 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP88_RS14435 (2917656) | 2917656..2918618 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP88_RS14440 (2918641) | 2918641..2919066 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP88_RS14445 (2919063) | 2919063..2919365 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP88_RS14450 (2919464) | 2919464..2919835 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP88_RS14455 (2919856) | 2919856..2920047 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP88_RS14460 (2920049) | 2920049..2920327 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP88_RS14465 (2920619) | 2920619..2920771 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP88_RS14470 (2920783) | 2920783..2921121 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP88_RS14475 (2921110) | 2921110..2921304 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP88_RS14480 (2921871) | 2921871..2922059 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP88_RS14485 (2922056) | 2922056..2922244 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP88_RS14490 (2922340) | 2922340..2924811 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP88_RS14495 (2924873) | 2924873..2925142 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 2901629..2929537 | 27908 | |
| - | inside | Prophage | sitABCD | - | 2784776..2933397 | 148621 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|