Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2124143..2124614 | Replicon | chromosome |
| Accession | NZ_CP124502 | ||
| Organism | Escherichia coli strain AVS0970 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP73_RS10055 | Protein ID | WP_001303511.1 |
| Coordinates | 2124143..2124421 (-) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP73_RS10060 | Protein ID | WP_001302048.1 |
| Coordinates | 2124423..2124614 (-) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP73_RS10020 (2119328) | 2119328..2119597 | - | 270 | WP_000003742.1 | excisionase | - |
| QJP73_RS10025 (2119659) | 2119659..2122130 | - | 2472 | WP_032284123.1 | exonuclease | - |
| QJP73_RS10030 (2122226) | 2122226..2122414 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP73_RS10035 (2122411) | 2122411..2122599 | - | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP73_RS10040 (2123166) | 2123166..2123360 | + | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP73_RS10045 (2123349) | 2123349..2123687 | - | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP73_RS10050 (2123699) | 2123699..2123851 | - | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP73_RS10055 (2124143) | 2124143..2124421 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP73_RS10060 (2124423) | 2124423..2124614 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP73_RS10065 (2124635) | 2124635..2125006 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP73_RS10070 (2125105) | 2125105..2125407 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP73_RS10075 (2125404) | 2125404..2125829 | + | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP73_RS10080 (2125852) | 2125852..2126814 | + | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP73_RS10085 (2126855) | 2126855..2127277 | + | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP73_RS10090 (2127274) | 2127274..2127528 | + | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP73_RS10095 (2127521) | 2127521..2127832 | + | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP73_RS10100 (2127961) | 2127961..2128143 | + | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP73_RS10105 (2128136) | 2128136..2128312 | + | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP73_RS10110 (2128309) | 2128309..2128668 | + | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP73_RS10115 (2128669) | 2128669..2128884 | + | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP73_RS10120 (2128886) | 2128886..2129104 | + | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP73_RS10125 (2129106) | 2129106..2129369 | + | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP73_RS10130 (2129380) | 2129380..2129547 | + | 168 | WP_000207997.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | sitABCD | - | 2118241..2231849 | 113608 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|