Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2964509..2964980 | Replicon | chromosome |
| Accession | NZ_CP124339 | ||
| Organism | Escherichia coli strain AVS0713 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP93_RS14600 | Protein ID | WP_001303511.1 |
| Coordinates | 2964702..2964980 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP93_RS14595 | Protein ID | WP_001302048.1 |
| Coordinates | 2964509..2964700 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP93_RS14525 (2959576) | 2959576..2959743 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP93_RS14530 (2959754) | 2959754..2960017 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP93_RS14535 (2960019) | 2960019..2960237 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP93_RS14540 (2960239) | 2960239..2960454 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP93_RS14545 (2960455) | 2960455..2960814 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP93_RS14550 (2960811) | 2960811..2960987 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP93_RS14555 (2960980) | 2960980..2961162 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP93_RS14560 (2961291) | 2961291..2961602 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP93_RS14565 (2961595) | 2961595..2961849 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP93_RS14570 (2961846) | 2961846..2962268 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP93_RS14575 (2962309) | 2962309..2963271 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP93_RS14580 (2963294) | 2963294..2963719 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP93_RS14585 (2963716) | 2963716..2964018 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP93_RS14590 (2964117) | 2964117..2964488 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP93_RS14595 (2964509) | 2964509..2964700 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP93_RS14600 (2964702) | 2964702..2964980 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP93_RS14605 (2965272) | 2965272..2965424 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP93_RS14610 (2965436) | 2965436..2965774 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP93_RS14615 (2965763) | 2965763..2965957 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP93_RS14620 (2966524) | 2966524..2966712 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP93_RS14625 (2966709) | 2966709..2966897 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP93_RS14630 (2966993) | 2966993..2969464 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP93_RS14635 (2969526) | 2969526..2969795 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 2946282..2974190 | 27908 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|