Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2963089..2963560 | Replicon | chromosome |
| Accession | NZ_CP124326 | ||
| Organism | Escherichia coli strain AVS0285 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP69_RS14605 | Protein ID | WP_001303511.1 |
| Coordinates | 2963282..2963560 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP69_RS14600 | Protein ID | WP_001302048.1 |
| Coordinates | 2963089..2963280 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP69_RS14530 (2958156) | 2958156..2958323 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP69_RS14535 (2958334) | 2958334..2958597 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP69_RS14540 (2958599) | 2958599..2958817 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP69_RS14545 (2958819) | 2958819..2959034 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP69_RS14550 (2959035) | 2959035..2959394 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP69_RS14555 (2959391) | 2959391..2959567 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP69_RS14560 (2959560) | 2959560..2959742 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP69_RS14565 (2959871) | 2959871..2960182 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP69_RS14570 (2960175) | 2960175..2960429 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP69_RS14575 (2960426) | 2960426..2960848 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP69_RS14580 (2960889) | 2960889..2961851 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP69_RS14585 (2961874) | 2961874..2962299 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP69_RS14590 (2962296) | 2962296..2962598 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP69_RS14595 (2962697) | 2962697..2963068 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP69_RS14600 (2963089) | 2963089..2963280 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP69_RS14605 (2963282) | 2963282..2963560 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP69_RS14610 (2963852) | 2963852..2964004 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP69_RS14615 (2964016) | 2964016..2964354 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP69_RS14620 (2964343) | 2964343..2964537 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP69_RS14625 (2965104) | 2965104..2965292 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP69_RS14630 (2965289) | 2965289..2965477 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP69_RS14635 (2965573) | 2965573..2968044 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP69_RS14640 (2968106) | 2968106..2968375 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 2944862..2972770 | 27908 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|